Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TTC30AQ86WT1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TTC30AQ86WT1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TTC30AQ86WT1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC30AQ86WT1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC30AQ86WT1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TTC30AQ86WT1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC30AQ86WT1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TTC30AQ86WT1 AL353692.3-201ENST00000407031 1396 ntBASIC19.18■□□□□ 0.66
TTC30AQ86WT1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TTC30AQ86WT1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 TSPY22P-201ENST00000427496 604 ntBASIC19.17■□□□□ 0.66
TTC30AQ86WT1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 ABALON-201ENST00000629058 1903 ntBASIC19.17■□□□□ 0.66
TTC30AQ86WT1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TTC30AQ86WT1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 AC026396.1-201ENST00000419388 421 ntBASIC19.16■□□□□ 0.66
TTC30AQ86WT1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TTC30AQ86WT1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.15■□□□□ 0.66
TTC30AQ86WT1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms