Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VPS13BQ7Z7G8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 AC112698.1-201ENST00000510299 916 ntBASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 AC009154.2-201ENST00000621177 724 ntBASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 AC008735.5-201ENST00000623544 497 ntBASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.1□□□□□ -0.63
VPS13BQ7Z7G8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 LINC00602-201ENST00000629776 2065 ntBASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 MIR770-201ENST00000390219 98 ntBASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 ABCD1P5-201ENST00000445663 754 ntBASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 AC006504.4-201ENST00000592118 1568 ntBASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 HCG4B-203ENST00000450128 991 ntBASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 AL139288.1-201ENST00000623748 933 ntBASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VPS13BQ7Z7G8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms