Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP1BQ7LBR1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHMP1BQ7LBR1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 AC112907.2-201ENST00000448639 330 ntBASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 AC068587.9-201ENST00000641814 219 ntBASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP1BQ7LBR1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 AC104581.1-202ENST00000635932 2618 ntBASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 AC009065.1-201ENST00000564055 1225 ntBASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHMP1BQ7LBR1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP1BQ7LBR1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms