Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF44Q7L0R7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 PHGDH-209ENST00000641074 1780 ntBASIC17.33■□□□□ 0.37
RNF44Q7L0R7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF44Q7L0R7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 AC090616.6-201ENST00000582640 721 ntBASIC17.33■□□□□ 0.36
RNF44Q7L0R7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF44Q7L0R7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 AC093010.1-201ENST00000473625 1624 ntBASIC17.32■□□□□ 0.36
RNF44Q7L0R7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 AL592071.1-201ENST00000611956 408 ntBASIC17.32■□□□□ 0.36
RNF44Q7L0R7 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.32■□□□□ 0.36
RNF44Q7L0R7 AC093677.2-201ENST00000600169 1863 ntBASIC17.32■□□□□ 0.36
RNF44Q7L0R7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RNF44Q7L0R7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 RN7SL606P-201ENST00000472779 293 ntBASIC17.31■□□□□ 0.36
RNF44Q7L0R7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 GUSBP12-201ENST00000513727 720 ntBASIC17.31■□□□□ 0.36
RNF44Q7L0R7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 AP002414.4-201ENST00000589764 1148 ntBASIC17.31■□□□□ 0.36
RNF44Q7L0R7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.31■□□□□ 0.36
RNF44Q7L0R7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF44Q7L0R7 LINC00602-201ENST00000629776 2065 ntBASIC17.31■□□□□ 0.36
RNF44Q7L0R7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms