Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13CQ709C8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
VPS13CQ709C8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13CQ709C8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15□□□□□ -0.01
VPS13CQ709C8 MIR770-201ENST00000390219 98 ntBASIC15□□□□□ -0.01
VPS13CQ709C8 LAGE3P1-201ENST00000425356 484 ntBASIC15□□□□□ -0.01
VPS13CQ709C8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15□□□□□ -0.01
VPS13CQ709C8 AC007967.3-201ENST00000434308 558 ntBASIC15□□□□□ -0.01
VPS13CQ709C8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS13CQ709C8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 AC097374.2-201ENST00000618617 1306 ntBASIC14.99□□□□□ -0.01
VPS13CQ709C8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 LINC01126-201ENST00000623515 1646 ntBASIC14.99□□□□□ -0.01
VPS13CQ709C8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13CQ709C8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 AC112698.1-201ENST00000510299 916 ntBASIC14.99□□□□□ -0.01
VPS13CQ709C8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS13CQ709C8 AC079776.2-201ENST00000641154 1609 ntBASIC14.99□□□□□ -0.01
VPS13CQ709C8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 AC064836.3-201ENST00000607928 673 ntBASIC14.98□□□□□ -0.01
VPS13CQ709C8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13CQ709C8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS13CQ709C8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 AC109322.1-201ENST00000524499 1264 ntBASIC14.97□□□□□ -0.01
VPS13CQ709C8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 SIGLEC16-201ENST00000599858 1437 ntBASIC14.97□□□□□ -0.01
VPS13CQ709C8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
VPS13CQ709C8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VPS13CQ709C8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms