Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.1■□□□□ 0.81
SWSAP1Q6NVH7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.1■□□□□ 0.81
SWSAP1Q6NVH7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.1■□□□□ 0.81
SWSAP1Q6NVH7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SWSAP1Q6NVH7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.1■□□□□ 0.81
SWSAP1Q6NVH7 TP73-AS1-210ENST00000637775 1455 ntBASIC20.1■□□□□ 0.81
SWSAP1Q6NVH7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SWSAP1Q6NVH7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SWSAP1Q6NVH7 AC125634.1-201ENST00000438758 1403 ntBASIC20.1■□□□□ 0.81
SWSAP1Q6NVH7 AC104581.1-202ENST00000635932 2618 ntBASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 RCN1P2-201ENST00000398357 915 ntBASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 AL138831.2-201ENST00000606564 490 ntBASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SWSAP1Q6NVH7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 FAAHP1-202ENST00000446499 1238 ntBASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 AL591684.3-201ENST00000605187 298 ntBASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.08■□□□□ 0.81
SWSAP1Q6NVH7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SWSAP1Q6NVH7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 AC020763.4-201ENST00000623414 4170 ntBASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 AC009533.2-201ENST00000543664 586 ntBASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 AC114341.1-201ENST00000618070 349 ntBASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SWSAP1Q6NVH7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SWSAP1Q6NVH7 AC090164.3-201ENST00000610780 2143 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms