Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 AC091076.1-201ENST00000610741 619 ntBASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPP4R3AQ6IN85 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 TSPY22P-201ENST00000427496 604 ntBASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 DUTP2-201ENST00000519164 463 ntBASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 KRT8P26-201ENST00000534154 1276 ntBASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.54■□□□□ 0.88
PPP4R3AQ6IN85 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 REXO1L9P-201ENST00000604264 2108 ntBASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPP4R3AQ6IN85 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 KRT18P65-201ENST00000439811 1286 ntBASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPP4R3AQ6IN85 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PPP4R3AQ6IN85 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PPP4R3AQ6IN85 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
PPP4R3AQ6IN85 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PPP4R3AQ6IN85 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.52■□□□□ 0.87
PPP4R3AQ6IN85 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PPP4R3AQ6IN85 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPP4R3AQ6IN85 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms