Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.86■□□□□ 0.61
TTC39BQ5VTQ0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 SDHAP2-201ENST00000455183 2001 ntBASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 AC011498.5-201ENST00000592027 486 ntBASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TTC39BQ5VTQ0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 UPK3BP1-201ENST00000428678 509 ntBASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 AP003733.1-201ENST00000491725 852 ntBASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 AC069148.1-201ENST00000608741 768 ntBASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TTC39BQ5VTQ0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39BQ5VTQ0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39BQ5VTQ0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TTC39BQ5VTQ0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39BQ5VTQ0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TTC39BQ5VTQ0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TTC39BQ5VTQ0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms