Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 AC009947.2-201ENST00000444014 672 ntBASIC11.99□□□□□ -0.49
SYCNQ0VAF6 TSPY15P-201ENST00000457163 923 ntBASIC11.99□□□□□ -0.49
SYCNQ0VAF6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 KRT8P9-201ENST00000558927 1449 ntBASIC11.99□□□□□ -0.49
SYCNQ0VAF6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 AC138028.4-201ENST00000564984 1845 ntBASIC11.99□□□□□ -0.49
SYCNQ0VAF6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 AC099343.3-201ENST00000605834 2503 ntBASIC11.99□□□□□ -0.49
SYCNQ0VAF6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 FLJ13224-201ENST00000313737 1514 ntBASIC11.98□□□□□ -0.49
SYCNQ0VAF6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 LINC01568-207ENST00000641790 1380 ntBASIC11.98□□□□□ -0.49
SYCNQ0VAF6 KRT18P22-201ENST00000402024 1347 ntBASIC11.98□□□□□ -0.49
SYCNQ0VAF6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 ECEL1P2-202ENST00000465689 757 ntBASIC11.98□□□□□ -0.49
SYCNQ0VAF6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 AC010240.3-201ENST00000607688 395 ntBASIC11.98□□□□□ -0.49
SYCNQ0VAF6 AC092865.7-201ENST00000641832 219 ntBASIC11.98□□□□□ -0.49
SYCNQ0VAF6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 AL096828.2-201ENST00000567259 1965 ntBASIC11.98□□□□□ -0.49
SYCNQ0VAF6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 NOC2LP2-201ENST00000407594 1944 ntBASIC11.98□□□□□ -0.49
SYCNQ0VAF6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
SYCNQ0VAF6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SYCNQ0VAF6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SYCNQ0VAF6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SYCNQ0VAF6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SYCNQ0VAF6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC11.97□□□□□ -0.49
SYCNQ0VAF6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms