Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DSC1Q08554 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
DSC1Q08554 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.17■□□□□ 0.66
DSC1Q08554 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.16■□□□□ 0.66
DSC1Q08554 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DSC1Q08554 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.16■□□□□ 0.66
DSC1Q08554 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.16■□□□□ 0.66
DSC1Q08554 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.16■□□□□ 0.66
DSC1Q08554 AC122714.2-201ENST00000502787 707 ntBASIC19.16■□□□□ 0.66
DSC1Q08554 AC025062.2-201ENST00000605477 670 ntBASIC19.16■□□□□ 0.66
DSC1Q08554 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.16■□□□□ 0.66
DSC1Q08554 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
DSC1Q08554 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
DSC1Q08554 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DSC1Q08554 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DSC1Q08554 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
DSC1Q08554 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
DSC1Q08554 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
DSC1Q08554 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.15■□□□□ 0.66
DSC1Q08554 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DSC1Q08554 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.15■□□□□ 0.66
DSC1Q08554 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.15■□□□□ 0.66
DSC1Q08554 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.15■□□□□ 0.66
DSC1Q08554 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.15■□□□□ 0.66
DSC1Q08554 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.15■□□□□ 0.66
DSC1Q08554 AC106730.1-201ENST00000566722 1090 ntBASIC19.15■□□□□ 0.66
DSC1Q08554 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.15■□□□□ 0.66
DSC1Q08554 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DSC1Q08554 AC116407.3-201ENST00000623905 1129 ntBASIC19.15■□□□□ 0.66
DSC1Q08554 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.15■□□□□ 0.66
DSC1Q08554 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DSC1Q08554 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
DSC1Q08554 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.15■□□□□ 0.66
DSC1Q08554 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DSC1Q08554 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DSC1Q08554 AP000974.1-201ENST00000623909 2387 ntBASIC19.14■□□□□ 0.66
DSC1Q08554 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DSC1Q08554 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DSC1Q08554 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.14■□□□□ 0.65
DSC1Q08554 RPS2P28-201ENST00000314255 741 ntBASIC19.14■□□□□ 0.65
DSC1Q08554 RPS2P1-201ENST00000434010 821 ntBASIC19.14■□□□□ 0.65
DSC1Q08554 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.14■□□□□ 0.65
DSC1Q08554 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.14■□□□□ 0.65
DSC1Q08554 NKAPP1-205ENST00000585790 367 ntBASIC19.14■□□□□ 0.65
DSC1Q08554 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DSC1Q08554 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DSC1Q08554 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DSC1Q08554 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.14■□□□□ 0.65
DSC1Q08554 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DSC1Q08554 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DSC1Q08554 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DSC1Q08554 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DSC1Q08554 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DSC1Q08554 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
DSC1Q08554 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DSC1Q08554 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
DSC1Q08554 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DSC1Q08554 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DSC1Q08554 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.13■□□□□ 0.65
DSC1Q08554 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DSC1Q08554 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DSC1Q08554 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DSC1Q08554 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DSC1Q08554 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.13■□□□□ 0.65
DSC1Q08554 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.13■□□□□ 0.65
DSC1Q08554 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DSC1Q08554 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.13■□□□□ 0.65
DSC1Q08554 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.13■□□□□ 0.65
DSC1Q08554 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DSC1Q08554 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms