Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19■□□□□ 0.63
USP46P62068 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19■□□□□ 0.63
USP46P62068 ABR-217ENST00000572441 563 ntTSL 4 BASIC19■□□□□ 0.63
USP46P62068 RN7SL510P-201ENST00000581311 263 ntBASIC19■□□□□ 0.63
USP46P62068 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19■□□□□ 0.63
USP46P62068 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19■□□□□ 0.63
USP46P62068 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19■□□□□ 0.63
USP46P62068 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19■□□□□ 0.63
USP46P62068 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
USP46P62068 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP46P62068 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
USP46P62068 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP46P62068 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
USP46P62068 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP46P62068 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP46P62068 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP46P62068 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.99■□□□□ 0.63
USP46P62068 AC246785.2-201ENST00000432512 513 ntBASIC18.99■□□□□ 0.63
USP46P62068 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.99■□□□□ 0.63
USP46P62068 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.99■□□□□ 0.63
USP46P62068 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
USP46P62068 KRT18P31-201ENST00000506277 1292 ntBASIC18.99■□□□□ 0.63
USP46P62068 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.99■□□□□ 0.63
USP46P62068 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP46P62068 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.99■□□□□ 0.63
USP46P62068 IFNL4P1-201ENST00000607083 540 ntBASIC18.99■□□□□ 0.63
USP46P62068 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.99■□□□□ 0.63
USP46P62068 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.99■□□□□ 0.63
USP46P62068 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP46P62068 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
USP46P62068 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP46P62068 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP46P62068 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
USP46P62068 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.99■□□□□ 0.63
USP46P62068 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
USP46P62068 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.98■□□□□ 0.63
USP46P62068 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
USP46P62068 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.98■□□□□ 0.63
USP46P62068 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.98■□□□□ 0.63
USP46P62068 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
USP46P62068 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
USP46P62068 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
USP46P62068 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.98■□□□□ 0.63
USP46P62068 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.98■□□□□ 0.63
USP46P62068 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.98■□□□□ 0.63
USP46P62068 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 AL691432.3-201ENST00000621860 400 ntBASIC18.98■□□□□ 0.63
USP46P62068 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
USP46P62068 AC020916.1-201ENST00000587762 1774 ntBASIC18.98■□□□□ 0.63
USP46P62068 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
USP46P62068 AC132938.6-201ENST00000623828 1655 ntBASIC18.98■□□□□ 0.63
USP46P62068 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
USP46P62068 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
USP46P62068 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP46P62068 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
USP46P62068 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP46P62068 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.97■□□□□ 0.63
USP46P62068 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.97■□□□□ 0.63
USP46P62068 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.97■□□□□ 0.63
USP46P62068 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 VENTXP7-201ENST00000475503 772 ntBASIC18.97■□□□□ 0.63
USP46P62068 AC091304.2-201ENST00000564639 760 ntBASIC18.97■□□□□ 0.63
USP46P62068 AC111152.3-201ENST00000569699 673 ntBASIC18.97■□□□□ 0.63
USP46P62068 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.97■□□□□ 0.63
USP46P62068 AC005336.2-201ENST00000593183 939 ntBASIC18.97■□□□□ 0.63
USP46P62068 AL121772.3-201ENST00000610840 674 ntBASIC18.97■□□□□ 0.63
USP46P62068 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USP46P62068 AC009154.2-201ENST00000621177 724 ntBASIC18.97■□□□□ 0.63
USP46P62068 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.97■□□□□ 0.63
USP46P62068 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.97■□□□□ 0.63
USP46P62068 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.97■□□□□ 0.63
USP46P62068 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP46P62068 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP46P62068 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms