Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.26■□□□□ 0.51
LIMK2P53671 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.26■□□□□ 0.51
LIMK2P53671 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.26■□□□□ 0.51
LIMK2P53671 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LIMK2P53671 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.26■□□□□ 0.51
LIMK2P53671 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LIMK2P53671 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIMK2P53671 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
LIMK2P53671 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.26■□□□□ 0.51
LIMK2P53671 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LIMK2P53671 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.25■□□□□ 0.51
LIMK2P53671 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LIMK2P53671 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
LIMK2P53671 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.25■□□□□ 0.51
LIMK2P53671 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.25■□□□□ 0.51
LIMK2P53671 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LIMK2P53671 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LIMK2P53671 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LIMK2P53671 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LIMK2P53671 LTB4R2-202ENST00000528054 3092 ntBASIC18.25■□□□□ 0.51
LIMK2P53671 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
LIMK2P53671 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.25■□□□□ 0.51
LIMK2P53671 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 PCED1CP-201ENST00000419887 785 ntBASIC18.25■□□□□ 0.51
LIMK2P53671 KRT18P23-201ENST00000435622 1283 ntBASIC18.25■□□□□ 0.51
LIMK2P53671 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.25■□□□□ 0.51
LIMK2P53671 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.25■□□□□ 0.51
LIMK2P53671 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
LIMK2P53671 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
LIMK2P53671 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LIMK2P53671 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.25■□□□□ 0.51
LIMK2P53671 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LIMK2P53671 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
LIMK2P53671 AC093010.1-201ENST00000473625 1624 ntBASIC18.24■□□□□ 0.51
LIMK2P53671 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.24■□□□□ 0.51
LIMK2P53671 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LIMK2P53671 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LIMK2P53671 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.24■□□□□ 0.51
LIMK2P53671 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.24■□□□□ 0.51
LIMK2P53671 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.24■□□□□ 0.51
LIMK2P53671 KRT18P38-201ENST00000449496 1282 ntBASIC18.24■□□□□ 0.51
LIMK2P53671 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.24■□□□□ 0.51
LIMK2P53671 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
LIMK2P53671 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.24■□□□□ 0.51
LIMK2P53671 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.24■□□□□ 0.51
LIMK2P53671 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.24■□□□□ 0.51
LIMK2P53671 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.24■□□□□ 0.51
LIMK2P53671 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.24■□□□□ 0.51
LIMK2P53671 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 AC020916.1-201ENST00000587762 1774 ntBASIC18.24■□□□□ 0.51
LIMK2P53671 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.24■□□□□ 0.51
LIMK2P53671 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.24■□□□□ 0.51
LIMK2P53671 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LIMK2P53671 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LIMK2P53671 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIMK2P53671 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIMK2P53671 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LIMK2P53671 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LIMK2P53671 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
LIMK2P53671 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIMK2P53671 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LIMK2P53671 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LIMK2P53671 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
LIMK2P53671 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms