Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK3P51956 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK3P51956 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK3P51956 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK3P51956 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK3P51956 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEK3P51956 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.66■□□□□ 0.58
NEK3P51956 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEK3P51956 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.66■□□□□ 0.58
NEK3P51956 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK3P51956 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
NEK3P51956 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.66■□□□□ 0.58
NEK3P51956 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.66■□□□□ 0.58
NEK3P51956 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.66■□□□□ 0.58
NEK3P51956 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.66■□□□□ 0.58
NEK3P51956 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK3P51956 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK3P51956 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NEK3P51956 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK3P51956 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK3P51956 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK3P51956 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
NEK3P51956 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NEK3P51956 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
NEK3P51956 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NEK3P51956 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NEK3P51956 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.65■□□□□ 0.58
NEK3P51956 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.65■□□□□ 0.58
NEK3P51956 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK3P51956 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NEK3P51956 SPDYE13P-201ENST00000445314 798 ntBASIC18.65■□□□□ 0.58
NEK3P51956 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.65■□□□□ 0.58
NEK3P51956 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
NEK3P51956 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.65■□□□□ 0.58
NEK3P51956 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.65■□□□□ 0.58
NEK3P51956 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK3P51956 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NEK3P51956 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
NEK3P51956 LINC00896-202ENST00000609602 2128 ntBASIC18.65■□□□□ 0.58
NEK3P51956 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK3P51956 AC093677.2-201ENST00000600169 1863 ntBASIC18.65■□□□□ 0.58
NEK3P51956 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
NEK3P51956 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.64■□□□□ 0.58
NEK3P51956 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
NEK3P51956 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
NEK3P51956 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.64■□□□□ 0.58
NEK3P51956 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.64■□□□□ 0.58
NEK3P51956 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK3P51956 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK3P51956 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK3P51956 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK3P51956 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK3P51956 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NEK3P51956 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NEK3P51956 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NEK3P51956 AL136038.4-201ENST00000603606 1261 ntBASIC18.64■□□□□ 0.57
NEK3P51956 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.64■□□□□ 0.57
NEK3P51956 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK3P51956 AL357033.4-201ENST00000617703 1807 ntBASIC18.64■□□□□ 0.57
NEK3P51956 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK3P51956 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEK3P51956 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK3P51956 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.64■□□□□ 0.57
NEK3P51956 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NEK3P51956 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEK3P51956 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NEK3P51956 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
NEK3P51956 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NEK3P51956 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.64■□□□□ 0.57
NEK3P51956 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NEK3P51956 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.63■□□□□ 0.57
NEK3P51956 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NEK3P51956 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 AC099398.1-201ENST00000567919 2776 ntBASIC18.63■□□□□ 0.57
NEK3P51956 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NEK3P51956 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NEK3P51956 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 AL645929.1-201ENST00000420084 975 ntBASIC18.63■□□□□ 0.57
NEK3P51956 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.63■□□□□ 0.57
NEK3P51956 MIR3180-4-201ENST00000582223 153 ntBASIC18.63■□□□□ 0.57
NEK3P51956 AC079602.3-201ENST00000623931 403 ntBASIC18.63■□□□□ 0.57
NEK3P51956 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.63■□□□□ 0.57
NEK3P51956 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NEK3P51956 HCG11-201ENST00000411553 5696 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms