Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLCNKAP51800 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 PHGDH-209ENST00000641074 1780 ntBASIC17.72■□□□□ 0.43
CLCNKAP51800 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCNKAP51800 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 KRT18P65-201ENST00000439811 1286 ntBASIC17.72■□□□□ 0.43
CLCNKAP51800 LINC00265-3P-201ENST00000447588 903 ntBASIC17.72■□□□□ 0.43
CLCNKAP51800 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.72■□□□□ 0.43
CLCNKAP51800 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCNKAP51800 VENTXP7-201ENST00000475503 772 ntBASIC17.72■□□□□ 0.43
CLCNKAP51800 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCNKAP51800 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLCNKAP51800 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CLCNKAP51800 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCNKAP51800 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCNKAP51800 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLCNKAP51800 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCNKAP51800 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 AC009113.1-201ENST00000570267 2443 ntBASIC17.71■□□□□ 0.43
CLCNKAP51800 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCNKAP51800 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCNKAP51800 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLCNKAP51800 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 AC068472.1-201ENST00000474589 881 ntBASIC17.71■□□□□ 0.43
CLCNKAP51800 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCNKAP51800 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCNKAP51800 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCNKAP51800 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
CLCNKAP51800 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CLCNKAP51800 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.71■□□□□ 0.43
CLCNKAP51800 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCNKAP51800 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CLCNKAP51800 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCNKAP51800 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCNKAP51800 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCNKAP51800 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CLCNKAP51800 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCNKAP51800 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 HTR7P1-202ENST00000624664 4411 ntBASIC17.7■□□□□ 0.42
CLCNKAP51800 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CLCNKAP51800 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.7■□□□□ 0.42
CLCNKAP51800 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCNKAP51800 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 AL845331.1-201ENST00000424978 1190 ntBASIC17.7■□□□□ 0.42
CLCNKAP51800 IGHV3-47-201ENST00000425060 335 ntBASIC17.7■□□□□ 0.42
CLCNKAP51800 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCNKAP51800 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.7■□□□□ 0.42
CLCNKAP51800 AP000867.3-201ENST00000524675 377 ntBASIC17.7■□□□□ 0.42
CLCNKAP51800 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCNKAP51800 AC011840.4-201ENST00000578471 627 ntBASIC17.7■□□□□ 0.42
CLCNKAP51800 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.7■□□□□ 0.42
CLCNKAP51800 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCNKAP51800 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCNKAP51800 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms