Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF144AP50876 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RNF144AP50876 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF144AP50876 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF144AP50876 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF144AP50876 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF144AP50876 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.84■□□□□ 0.29
RNF144AP50876 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.84■□□□□ 0.29
RNF144AP50876 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF144AP50876 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RNF144AP50876 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF144AP50876 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF144AP50876 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF144AP50876 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RNF144AP50876 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF144AP50876 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RNF144AP50876 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
RNF144AP50876 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF144AP50876 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF144AP50876 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF144AP50876 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF144AP50876 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF144AP50876 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF144AP50876 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF144AP50876 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF144AP50876 AC106820.2-201ENST00000563775 3264 ntBASIC16.83■□□□□ 0.28
RNF144AP50876 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF144AP50876 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF144AP50876 AC140113.3-201ENST00000605663 199 ntBASIC16.83■□□□□ 0.28
RNF144AP50876 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF144AP50876 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF144AP50876 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF144AP50876 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RNF144AP50876 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RNF144AP50876 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF144AP50876 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF144AP50876 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RNF144AP50876 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF144AP50876 AL024508.2-201ENST00000607749 1894 ntBASIC16.82■□□□□ 0.28
RNF144AP50876 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF144AP50876 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF144AP50876 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF144AP50876 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF144AP50876 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF144AP50876 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF144AP50876 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF144AP50876 LINC01023-201ENST00000606054 436 ntBASIC16.82■□□□□ 0.28
RNF144AP50876 AC011558.1-201ENST00000623459 338 ntBASIC16.82■□□□□ 0.28
RNF144AP50876 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF144AP50876 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF144AP50876 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF144AP50876 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF144AP50876 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms