Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CASP4P49662 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CASP4P49662 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CASP4P49662 KRT89P-201ENST00000620027 1478 ntBASIC19.73■□□□□ 0.75
CASP4P49662 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CASP4P49662 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CASP4P49662 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP4P49662 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP4P49662 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP4P49662 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP4P49662 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CASP4P49662 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP4P49662 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.73■□□□□ 0.75
CASP4P49662 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP4P49662 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CASP4P49662 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.73■□□□□ 0.75
CASP4P49662 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.73■□□□□ 0.75
CASP4P49662 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.73■□□□□ 0.75
CASP4P49662 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.73■□□□□ 0.75
CASP4P49662 AC004263.2-201ENST00000617183 678 ntBASIC19.73■□□□□ 0.75
CASP4P49662 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CASP4P49662 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CASP4P49662 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CASP4P49662 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.73■□□□□ 0.75
CASP4P49662 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.73■□□□□ 0.75
CASP4P49662 AC134043.2-201ENST00000624206 2238 ntBASIC19.72■□□□□ 0.75
CASP4P49662 PCDHB18P-201ENST00000524813 2368 ntBASIC19.72■□□□□ 0.75
CASP4P49662 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 AC012317.2-201ENST00000623305 2251 ntBASIC19.72■□□□□ 0.75
CASP4P49662 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.72■□□□□ 0.75
CASP4P49662 AL031133.1-201ENST00000406807 723 ntBASIC19.72■□□□□ 0.75
CASP4P49662 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.72■□□□□ 0.75
CASP4P49662 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.72■□□□□ 0.75
CASP4P49662 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CASP4P49662 KRT18P48-201ENST00000434763 852 ntBASIC19.72■□□□□ 0.75
CASP4P49662 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.72■□□□□ 0.75
CASP4P49662 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.72■□□□□ 0.75
CASP4P49662 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.72■□□□□ 0.75
CASP4P49662 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.72■□□□□ 0.75
CASP4P49662 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.72■□□□□ 0.75
CASP4P49662 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.72■□□□□ 0.75
CASP4P49662 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.72■□□□□ 0.75
CASP4P49662 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.72■□□□□ 0.75
CASP4P49662 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CASP4P49662 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CASP4P49662 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CASP4P49662 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.71■□□□□ 0.75
CASP4P49662 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.71■□□□□ 0.75
CASP4P49662 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.71■□□□□ 0.75
CASP4P49662 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CASP4P49662 DUTP2-201ENST00000519164 463 ntBASIC19.71■□□□□ 0.75
CASP4P49662 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.71■□□□□ 0.75
CASP4P49662 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.71■□□□□ 0.75
CASP4P49662 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.71■□□□□ 0.75
CASP4P49662 RNF126P1-202ENST00000569893 925 ntBASIC19.71■□□□□ 0.75
CASP4P49662 AC008687.5-201ENST00000593746 558 ntBASIC19.71■□□□□ 0.75
CASP4P49662 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.71■□□□□ 0.75
CASP4P49662 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.71■□□□□ 0.75
CASP4P49662 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CASP4P49662 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.71■□□□□ 0.75
CASP4P49662 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CASP4P49662 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CASP4P49662 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CASP4P49662 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CASP4P49662 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms