Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFX3P48380 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX3P48380 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFX3P48380 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX3P48380 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RFX3P48380 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX3P48380 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFX3P48380 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX3P48380 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFX3P48380 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX3P48380 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 TERF1P1-201ENST00000311003 1181 ntBASIC17.03■□□□□ 0.32
RFX3P48380 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX3P48380 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX3P48380 AP000523.1-201ENST00000398242 1049 ntBASIC17.03■□□□□ 0.32
RFX3P48380 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX3P48380 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.03■□□□□ 0.32
RFX3P48380 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.03■□□□□ 0.32
RFX3P48380 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 AC012306.2-201ENST00000609350 630 ntBASIC17.03■□□□□ 0.32
RFX3P48380 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFX3P48380 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 AC009102.3-201ENST00000623118 1491 ntBASIC17.03■□□□□ 0.32
RFX3P48380 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX3P48380 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFX3P48380 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX3P48380 ESPNP-201ENST00000270691 2015 ntBASIC17.03■□□□□ 0.32
RFX3P48380 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RFX3P48380 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX3P48380 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.02■□□□□ 0.32
RFX3P48380 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX3P48380 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX3P48380 NOC2LP2-201ENST00000407594 1944 ntBASIC17.02■□□□□ 0.32
RFX3P48380 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX3P48380 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.02■□□□□ 0.32
RFX3P48380 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX3P48380 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX3P48380 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX3P48380 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX3P48380 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.02■□□□□ 0.32
RFX3P48380 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RFX3P48380 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX3P48380 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX3P48380 AC104390.1-201ENST00000555663 520 ntBASIC17.02■□□□□ 0.32
RFX3P48380 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX3P48380 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX3P48380 AC010240.3-201ENST00000607688 395 ntBASIC17.02■□□□□ 0.32
RFX3P48380 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RFX3P48380 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX3P48380 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.02■□□□□ 0.31
RFX3P48380 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RFX3P48380 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX3P48380 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.02■□□□□ 0.31
RFX3P48380 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX3P48380 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX3P48380 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX3P48380 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX3P48380 AL133373.2-201ENST00000623187 2828 ntBASIC17.02■□□□□ 0.31
RFX3P48380 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RFX3P48380 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX3P48380 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX3P48380 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX3P48380 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX3P48380 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX3P48380 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX3P48380 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFX3P48380 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX3P48380 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 NEK4P2-201ENST00000580004 1012 ntBASIC17.01■□□□□ 0.31
RFX3P48380 AL138966.2-201ENST00000621997 464 ntBASIC17.01■□□□□ 0.31
RFX3P48380 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 AP000997.3-201ENST00000623333 2250 ntBASIC17.01■□□□□ 0.31
RFX3P48380 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX3P48380 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX3P48380 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX3P48380 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RFX3P48380 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX3P48380 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms