Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TM4SF4P48230 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF4P48230 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF4P48230 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF4P48230 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.53■□□□□ 0.88
TM4SF4P48230 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TM4SF4P48230 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.52■□□□□ 0.88
TM4SF4P48230 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM4SF4P48230 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM4SF4P48230 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM4SF4P48230 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.52■□□□□ 0.88
TM4SF4P48230 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TM4SF4P48230 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM4SF4P48230 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.52■□□□□ 0.88
TM4SF4P48230 AC015922.1-201ENST00000421102 1152 ntBASIC20.52■□□□□ 0.88
TM4SF4P48230 AC005034.1-201ENST00000426657 489 ntBASIC20.52■□□□□ 0.88
TM4SF4P48230 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.52■□□□□ 0.88
TM4SF4P48230 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.52■□□□□ 0.88
TM4SF4P48230 AC069262.1-201ENST00000539058 672 ntBASIC20.52■□□□□ 0.88
TM4SF4P48230 AC092902.6-201ENST00000641783 218 ntBASIC20.52■□□□□ 0.88
TM4SF4P48230 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM4SF4P48230 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.52■□□□□ 0.88
TM4SF4P48230 AC025580.3-201ENST00000617932 1424 ntBASIC20.52■□□□□ 0.87
TM4SF4P48230 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM4SF4P48230 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM4SF4P48230 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TM4SF4P48230 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.51■□□□□ 0.87
TM4SF4P48230 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM4SF4P48230 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM4SF4P48230 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.51■□□□□ 0.87
TM4SF4P48230 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.51■□□□□ 0.87
TM4SF4P48230 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.51■□□□□ 0.87
TM4SF4P48230 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM4SF4P48230 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.51■□□□□ 0.87
TM4SF4P48230 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.51■□□□□ 0.87
TM4SF4P48230 RNA5SP421-201ENST00000516864 134 ntBASIC20.51■□□□□ 0.87
TM4SF4P48230 AC091812.2-201ENST00000619081 385 ntBASIC20.51■□□□□ 0.87
TM4SF4P48230 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TM4SF4P48230 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TM4SF4P48230 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TM4SF4P48230 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM4SF4P48230 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.51■□□□□ 0.87
TM4SF4P48230 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.51■□□□□ 0.87
TM4SF4P48230 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.51■□□□□ 0.87
TM4SF4P48230 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TM4SF4P48230 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TM4SF4P48230 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TM4SF4P48230 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.51■□□□□ 0.87
TM4SF4P48230 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 AL121761.2-201ENST00000598007 1648 ntBASIC20.5■□□□□ 0.87
TM4SF4P48230 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TM4SF4P48230 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TM4SF4P48230 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.5■□□□□ 0.87
TM4SF4P48230 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.5■□□□□ 0.87
TM4SF4P48230 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.5■□□□□ 0.87
TM4SF4P48230 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TM4SF4P48230 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
TM4SF4P48230 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.5■□□□□ 0.87
TM4SF4P48230 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.5■□□□□ 0.87
TM4SF4P48230 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.5■□□□□ 0.87
TM4SF4P48230 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.5■□□□□ 0.87
TM4SF4P48230 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.5■□□□□ 0.87
TM4SF4P48230 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
TM4SF4P48230 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM4SF4P48230 AL353593.2-201ENST00000602529 1483 ntBASIC20.5■□□□□ 0.87
TM4SF4P48230 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF4P48230 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF4P48230 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TM4SF4P48230 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF4P48230 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.49■□□□□ 0.87
TM4SF4P48230 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF4P48230 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.49■□□□□ 0.87
TM4SF4P48230 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
TM4SF4P48230 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.49■□□□□ 0.87
TM4SF4P48230 AL805961.1-202ENST00000641562 540 ntBASIC20.49■□□□□ 0.87
TM4SF4P48230 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF4P48230 AL137060.1-201ENST00000618151 2648 ntBASIC20.49■□□□□ 0.87
TM4SF4P48230 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF4P48230 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF4P48230 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.49■□□□□ 0.87
TM4SF4P48230 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF4P48230 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TM4SF4P48230 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM4SF4P48230 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM4SF4P48230 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms