Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GABRA4P48169 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRA4P48169 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GABRA4P48169 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRA4P48169 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRA4P48169 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.11■□□□□ 0.33
GABRA4P48169 TP73-AS1-210ENST00000637775 1455 ntBASIC17.11■□□□□ 0.33
GABRA4P48169 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
GABRA4P48169 AC090164.3-201ENST00000610780 2143 ntBASIC17.11■□□□□ 0.33
GABRA4P48169 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRA4P48169 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.1■□□□□ 0.33
GABRA4P48169 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GABRA4P48169 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GABRA4P48169 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRA4P48169 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRA4P48169 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.1■□□□□ 0.33
GABRA4P48169 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.1■□□□□ 0.33
GABRA4P48169 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GABRA4P48169 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GABRA4P48169 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 RCN1P2-201ENST00000398357 915 ntBASIC17.1■□□□□ 0.33
GABRA4P48169 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
GABRA4P48169 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.1■□□□□ 0.33
GABRA4P48169 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.1■□□□□ 0.33
GABRA4P48169 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
GABRA4P48169 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRA4P48169 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.1■□□□□ 0.33
GABRA4P48169 MIR5100-201ENST00000579544 119 ntBASIC17.1■□□□□ 0.33
GABRA4P48169 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRA4P48169 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRA4P48169 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
GABRA4P48169 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.1■□□□□ 0.33
GABRA4P48169 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.1■□□□□ 0.33
GABRA4P48169 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRA4P48169 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GABRA4P48169 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.1■□□□□ 0.33
GABRA4P48169 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GABRA4P48169 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GABRA4P48169 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 AC004870.1-201ENST00000315132 882 ntBASIC17.09■□□□□ 0.33
GABRA4P48169 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.09■□□□□ 0.33
GABRA4P48169 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.09■□□□□ 0.33
GABRA4P48169 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.09■□□□□ 0.33
GABRA4P48169 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.09■□□□□ 0.33
GABRA4P48169 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.09■□□□□ 0.33
GABRA4P48169 FAAHP1-202ENST00000446499 1238 ntBASIC17.09■□□□□ 0.33
GABRA4P48169 AC096582.2-201ENST00000510860 516 ntBASIC17.09■□□□□ 0.33
GABRA4P48169 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 AC009533.2-201ENST00000543664 586 ntBASIC17.09■□□□□ 0.33
GABRA4P48169 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.09■□□□□ 0.33
GABRA4P48169 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.09■□□□□ 0.33
GABRA4P48169 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 AC011467.2-201ENST00000598425 242 ntBASIC17.09■□□□□ 0.33
GABRA4P48169 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.09■□□□□ 0.33
GABRA4P48169 KRT8P47-201ENST00000604727 1398 ntBASIC17.09■□□□□ 0.33
GABRA4P48169 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.09■□□□□ 0.33
GABRA4P48169 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.09■□□□□ 0.33
GABRA4P48169 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.09■□□□□ 0.33
GABRA4P48169 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GABRA4P48169 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms