Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.17■□□□□ 0.18
CDKN2AP42771 DUTP2-201ENST00000519164 463 ntBASIC16.17■□□□□ 0.18
CDKN2AP42771 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 AL512604.3-201ENST00000569583 964 ntBASIC16.17■□□□□ 0.18
CDKN2AP42771 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDKN2AP42771 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.17■□□□□ 0.18
CDKN2AP42771 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKN2AP42771 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDKN2AP42771 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.17■□□□□ 0.18
CDKN2AP42771 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKN2AP42771 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDKN2AP42771 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDKN2AP42771 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKN2AP42771 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2AP42771 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDKN2AP42771 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CDKN2AP42771 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2AP42771 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDKN2AP42771 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDKN2AP42771 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKN2AP42771 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKN2AP42771 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKN2AP42771 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2AP42771 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.16■□□□□ 0.18
CDKN2AP42771 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.16■□□□□ 0.18
CDKN2AP42771 NEK4P2-201ENST00000580004 1012 ntBASIC16.16■□□□□ 0.18
CDKN2AP42771 MIR3917-201ENST00000580971 93 ntBASIC16.16■□□□□ 0.18
CDKN2AP42771 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.16■□□□□ 0.18
CDKN2AP42771 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2AP42771 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2AP42771 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.16■□□□□ 0.18
CDKN2AP42771 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2AP42771 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CDKN2AP42771 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2AP42771 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.15■□□□□ 0.18
CDKN2AP42771 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CDKN2AP42771 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDKN2AP42771 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CDKN2AP42771 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKN2AP42771 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.15■□□□□ 0.18
CDKN2AP42771 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.15■□□□□ 0.18
CDKN2AP42771 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.15■□□□□ 0.18
CDKN2AP42771 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKN2AP42771 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.15■□□□□ 0.18
CDKN2AP42771 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDKN2AP42771 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKN2AP42771 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2AP42771 AC100803.2-201ENST00000562459 1963 ntBASIC16.15■□□□□ 0.18
CDKN2AP42771 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.14■□□□□ 0.18
CDKN2AP42771 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
CDKN2AP42771 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
CDKN2AP42771 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2AP42771 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.14■□□□□ 0.17
CDKN2AP42771 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.14■□□□□ 0.17
CDKN2AP42771 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2AP42771 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.14■□□□□ 0.17
CDKN2AP42771 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2AP42771 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2AP42771 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms