Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SNCAP37840 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.92□□□□□ -0.02
SNCAP37840 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.92□□□□□ -0.02
SNCAP37840 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.92□□□□□ -0.02
SNCAP37840 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.92□□□□□ -0.02
SNCAP37840 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.92□□□□□ -0.02
SNCAP37840 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.92□□□□□ -0.02
SNCAP37840 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SNCAP37840 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.92□□□□□ -0.02
SNCAP37840 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.92□□□□□ -0.02
SNCAP37840 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SNCAP37840 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.91□□□□□ -0.02
SNCAP37840 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SNCAP37840 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 PP12613-201ENST00000424958 2230 ntBASIC14.91□□□□□ -0.02
SNCAP37840 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.91□□□□□ -0.02
SNCAP37840 HLA-L-209ENST00000420110 1011 ntBASIC14.91□□□□□ -0.02
SNCAP37840 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.91□□□□□ -0.02
SNCAP37840 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.91□□□□□ -0.02
SNCAP37840 AP002982.1-201ENST00000492365 877 ntBASIC14.91□□□□□ -0.02
SNCAP37840 Z85996.1-201ENST00000494644 937 ntBASIC14.91□□□□□ -0.02
SNCAP37840 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.91□□□□□ -0.02
SNCAP37840 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.91□□□□□ -0.02
SNCAP37840 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.91□□□□□ -0.02
SNCAP37840 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.91□□□□□ -0.02
SNCAP37840 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.91□□□□□ -0.02
SNCAP37840 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 AL445675.2-201ENST00000620291 557 ntBASIC14.91□□□□□ -0.02
SNCAP37840 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 AL162727.3-201ENST00000635661 2787 ntBASIC14.91□□□□□ -0.02
SNCAP37840 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
SNCAP37840 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.91□□□□□ -0.02
SNCAP37840 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SNCAP37840 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
SNCAP37840 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SNCAP37840 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
SNCAP37840 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
SNCAP37840 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.9□□□□□ -0.02
SNCAP37840 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.9□□□□□ -0.02
SNCAP37840 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SNCAP37840 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SNCAP37840 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 POU5F1P3-201ENST00000428824 1078 ntBASIC14.9□□□□□ -0.02
SNCAP37840 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SNCAP37840 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SNCAP37840 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SNCAP37840 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.9□□□□□ -0.02
SNCAP37840 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms