Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CKS2P33552 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CKS2P33552 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CKS2P33552 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CKS2P33552 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.33□□□□□ -0.28
CKS2P33552 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CKS2P33552 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
CKS2P33552 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.33□□□□□ -0.28
CKS2P33552 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.33□□□□□ -0.28
CKS2P33552 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.33□□□□□ -0.28
CKS2P33552 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.33□□□□□ -0.28
CKS2P33552 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CKS2P33552 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CKS2P33552 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.32□□□□□ -0.28
CKS2P33552 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CKS2P33552 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 AL139384.1-201ENST00000612143 3047 ntBASIC13.32□□□□□ -0.28
CKS2P33552 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.32□□□□□ -0.28
CKS2P33552 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.32□□□□□ -0.28
CKS2P33552 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CKS2P33552 KRT8P3-201ENST00000519669 1449 ntBASIC13.32□□□□□ -0.28
CKS2P33552 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 BX276092.2-201ENST00000417668 665 ntBASIC13.32□□□□□ -0.28
CKS2P33552 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.32□□□□□ -0.28
CKS2P33552 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.32□□□□□ -0.28
CKS2P33552 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.32□□□□□ -0.28
CKS2P33552 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 AL121829.2-201ENST00000620908 328 ntBASIC13.32□□□□□ -0.28
CKS2P33552 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CKS2P33552 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CKS2P33552 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.32□□□□□ -0.28
CKS2P33552 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CKS2P33552 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CKS2P33552 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.31□□□□□ -0.28
CKS2P33552 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.31□□□□□ -0.28
CKS2P33552 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CKS2P33552 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CKS2P33552 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.31□□□□□ -0.28
CKS2P33552 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CKS2P33552 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms