Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 BNIP3P18-201ENST00000593976 575 ntBASIC18.54■□□□□ 0.56
SLC6A4P31645 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC6A4P31645 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SLC6A4P31645 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC6A4P31645 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SLC6A4P31645 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SLC6A4P31645 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.54■□□□□ 0.56
SLC6A4P31645 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC6A4P31645 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC6A4P31645 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A4P31645 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC6A4P31645 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC6A4P31645 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.53■□□□□ 0.56
SLC6A4P31645 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC6A4P31645 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.53■□□□□ 0.56
SLC6A4P31645 MINOS1P3-201ENST00000457048 203 ntBASIC18.53■□□□□ 0.56
SLC6A4P31645 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SLC6A4P31645 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC6A4P31645 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC6A4P31645 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC6A4P31645 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.53■□□□□ 0.56
SLC6A4P31645 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SLC6A4P31645 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC6A4P31645 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A4P31645 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLC6A4P31645 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SLC6A4P31645 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SLC6A4P31645 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC6A4P31645 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SLC6A4P31645 REXO1L9P-201ENST00000604264 2108 ntBASIC18.52■□□□□ 0.56
SLC6A4P31645 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC6A4P31645 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
SLC6A4P31645 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SLC6A4P31645 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SLC6A4P31645 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SLC6A4P31645 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC6A4P31645 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC6A4P31645 KRT18P31-201ENST00000506277 1292 ntBASIC18.52■□□□□ 0.56
SLC6A4P31645 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC6A4P31645 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SLC6A4P31645 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC6A4P31645 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC6A4P31645 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC6A4P31645 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SLC6A4P31645 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SLC6A4P31645 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A4P31645 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A4P31645 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A4P31645 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SLC6A4P31645 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A4P31645 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A4P31645 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC6A4P31645 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC6A4P31645 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A4P31645 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC6A4P31645 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
SLC6A4P31645 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A4P31645 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A4P31645 NUS1P2-201ENST00000417358 873 ntBASIC18.51■□□□□ 0.55
SLC6A4P31645 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC6A4P31645 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC6A4P31645 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A4P31645 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms