Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CASQ1P31415 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.45■□□□□ 0.7
CASQ1P31415 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 AL138688.1-201ENST00000624851 1594 ntBASIC19.45■□□□□ 0.7
CASQ1P31415 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.45■□□□□ 0.7
CASQ1P31415 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CASQ1P31415 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.45■□□□□ 0.7
CASQ1P31415 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.45■□□□□ 0.7
CASQ1P31415 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.45■□□□□ 0.7
CASQ1P31415 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.45■□□□□ 0.7
CASQ1P31415 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.45■□□□□ 0.7
CASQ1P31415 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.45■□□□□ 0.7
CASQ1P31415 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.45■□□□□ 0.7
CASQ1P31415 CROCCP2-202ENST00000412962 2773 ntBASIC19.45■□□□□ 0.7
CASQ1P31415 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.45■□□□□ 0.7
CASQ1P31415 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CASQ1P31415 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CASQ1P31415 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CASQ1P31415 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CASQ1P31415 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 FER1L4-210ENST00000615531 5998 ntBASIC19.45■□□□□ 0.7
CASQ1P31415 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 AC099343.3-201ENST00000605834 2503 ntBASIC19.45■□□□□ 0.7
CASQ1P31415 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASQ1P31415 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CASQ1P31415 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CASQ1P31415 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CASQ1P31415 CICP6-201ENST00000457191 2729 ntBASIC19.44■□□□□ 0.7
CASQ1P31415 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.44■□□□□ 0.7
CASQ1P31415 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CASQ1P31415 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.44■□□□□ 0.7
CASQ1P31415 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.44■□□□□ 0.7
CASQ1P31415 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.44■□□□□ 0.7
CASQ1P31415 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.44■□□□□ 0.7
CASQ1P31415 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CASQ1P31415 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CASQ1P31415 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CASQ1P31415 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.44■□□□□ 0.7
CASQ1P31415 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASQ1P31415 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CASQ1P31415 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CASQ1P31415 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.43■□□□□ 0.7
CASQ1P31415 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CASQ1P31415 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CASQ1P31415 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.43■□□□□ 0.7
CASQ1P31415 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 MIR663A-201ENST00000385250 93 ntBASIC19.43■□□□□ 0.7
CASQ1P31415 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.43■□□□□ 0.7
CASQ1P31415 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.43■□□□□ 0.7
CASQ1P31415 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.43■□□□□ 0.7
CASQ1P31415 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.43■□□□□ 0.7
CASQ1P31415 AC073111.5-205ENST00000641717 521 ntBASIC19.43■□□□□ 0.7
CASQ1P31415 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.43■□□□□ 0.7
CASQ1P31415 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.43■□□□□ 0.7
CASQ1P31415 UBALD1-205ENST00000590891 2641 ntBASIC19.43■□□□□ 0.7
CASQ1P31415 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.43■□□□□ 0.7
CASQ1P31415 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASQ1P31415 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CASQ1P31415 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CASQ1P31415 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.42■□□□□ 0.7
CASQ1P31415 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASQ1P31415 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.42■□□□□ 0.7
CASQ1P31415 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.42■□□□□ 0.7
CASQ1P31415 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.42■□□□□ 0.7
CASQ1P31415 AC080038.1-201ENST00000611274 1154 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms