Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA13P31271 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA13P31271 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA13P31271 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA13P31271 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA13P31271 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA13P31271 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXA13P31271 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA13P31271 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXA13P31271 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HOXA13P31271 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HOXA13P31271 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
HOXA13P31271 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA13P31271 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
HOXA13P31271 AC004870.1-201ENST00000315132 882 ntBASIC20.55■□□□□ 0.88
HOXA13P31271 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA13P31271 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXA13P31271 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.55■□□□□ 0.88
HOXA13P31271 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA13P31271 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HOXA13P31271 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA13P31271 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HOXA13P31271 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXA13P31271 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA13P31271 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXA13P31271 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.55■□□□□ 0.88
HOXA13P31271 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HOXA13P31271 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA13P31271 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA13P31271 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA13P31271 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.54■□□□□ 0.88
HOXA13P31271 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
HOXA13P31271 LINC01711-201ENST00000598340 967 ntBASIC20.54■□□□□ 0.88
HOXA13P31271 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXA13P31271 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
HOXA13P31271 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXA13P31271 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HOXA13P31271 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA13P31271 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXA13P31271 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXA13P31271 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HOXA13P31271 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXA13P31271 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA13P31271 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HOXA13P31271 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HOXA13P31271 AC090164.3-201ENST00000610780 2143 ntBASIC20.53■□□□□ 0.88
HOXA13P31271 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA13P31271 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA13P31271 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA13P31271 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 RCN1P2-201ENST00000398357 915 ntBASIC20.53■□□□□ 0.88
HOXA13P31271 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA13P31271 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXA13P31271 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA13P31271 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA13P31271 AC079781.3-201ENST00000449110 356 ntBASIC20.53■□□□□ 0.88
HOXA13P31271 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXA13P31271 KRT16P4-201ENST00000453883 522 ntBASIC20.53■□□□□ 0.88
HOXA13P31271 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.53■□□□□ 0.88
HOXA13P31271 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA13P31271 AL138831.2-201ENST00000606564 490 ntBASIC20.53■□□□□ 0.88
HOXA13P31271 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HOXA13P31271 TP73-AS1-210ENST00000637775 1455 ntBASIC20.53■□□□□ 0.88
HOXA13P31271 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA13P31271 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms