Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RFX1P22670 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.71■□□□□ 0.75
RFX1P22670 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.71■□□□□ 0.75
RFX1P22670 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.71■□□□□ 0.75
RFX1P22670 AC246785.2-201ENST00000432512 513 ntBASIC19.71■□□□□ 0.75
RFX1P22670 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
RFX1P22670 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.71■□□□□ 0.75
RFX1P22670 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.71■□□□□ 0.75
RFX1P22670 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.71■□□□□ 0.75
RFX1P22670 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.71■□□□□ 0.75
RFX1P22670 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX1P22670 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RFX1P22670 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 AC093010.1-201ENST00000473625 1624 ntBASIC19.7■□□□□ 0.74
RFX1P22670 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.7■□□□□ 0.74
RFX1P22670 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.7■□□□□ 0.74
RFX1P22670 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.7■□□□□ 0.74
RFX1P22670 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 RN7SL510P-201ENST00000581311 263 ntBASIC19.7■□□□□ 0.74
RFX1P22670 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.7■□□□□ 0.74
RFX1P22670 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.7■□□□□ 0.74
RFX1P22670 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.7■□□□□ 0.74
RFX1P22670 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.7■□□□□ 0.74
RFX1P22670 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFX1P22670 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.7■□□□□ 0.74
RFX1P22670 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX1P22670 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX1P22670 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
RFX1P22670 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX1P22670 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RFX1P22670 STARP1-201ENST00000397973 869 ntBASIC19.69■□□□□ 0.74
RFX1P22670 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.69■□□□□ 0.74
RFX1P22670 SEC1P-202ENST00000473944 940 ntBASIC19.69■□□□□ 0.74
RFX1P22670 AC092329.2-201ENST00000598402 547 ntBASIC19.69■□□□□ 0.74
RFX1P22670 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX1P22670 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.69■□□□□ 0.74
RFX1P22670 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 AC068880.1-201ENST00000507289 2297 ntBASIC19.69■□□□□ 0.74
RFX1P22670 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFX1P22670 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFX1P22670 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RFX1P22670 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX1P22670 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.68■□□□□ 0.74
RFX1P22670 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RFX1P22670 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RFX1P22670 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RFX1P22670 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX1P22670 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.68■□□□□ 0.74
RFX1P22670 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX1P22670 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX1P22670 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFX1P22670 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms