Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2AFXP16104 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
H2AFXP16104 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H2AFXP16104 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2AFXP16104 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
H2AFXP16104 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2AFXP16104 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2AFXP16104 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.8■□□□□ 0.6
H2AFXP16104 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H2AFXP16104 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2AFXP16104 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
H2AFXP16104 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
H2AFXP16104 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.79■□□□□ 0.6
H2AFXP16104 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.79■□□□□ 0.6
H2AFXP16104 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.79■□□□□ 0.6
H2AFXP16104 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.79■□□□□ 0.6
H2AFXP16104 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.79■□□□□ 0.6
H2AFXP16104 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
H2AFXP16104 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.79■□□□□ 0.6
H2AFXP16104 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.79■□□□□ 0.6
H2AFXP16104 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.79■□□□□ 0.6
H2AFXP16104 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
H2AFXP16104 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 AC100803.2-201ENST00000562459 1963 ntBASIC18.79■□□□□ 0.6
H2AFXP16104 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2AFXP16104 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.78■□□□□ 0.6
H2AFXP16104 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.78■□□□□ 0.6
H2AFXP16104 AL513523.2-202ENST00000427283 2040 ntBASIC18.78■□□□□ 0.6
H2AFXP16104 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
H2AFXP16104 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 KRT8P50-201ENST00000562022 1438 ntBASIC18.78■□□□□ 0.6
H2AFXP16104 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.78■□□□□ 0.6
H2AFXP16104 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.78■□□□□ 0.6
H2AFXP16104 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.78■□□□□ 0.6
H2AFXP16104 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
H2AFXP16104 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
H2AFXP16104 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.78■□□□□ 0.6
H2AFXP16104 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.78■□□□□ 0.6
H2AFXP16104 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.78■□□□□ 0.6
H2AFXP16104 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2AFXP16104 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
H2AFXP16104 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.77■□□□□ 0.6
H2AFXP16104 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2AFXP16104 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
H2AFXP16104 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.77■□□□□ 0.6
H2AFXP16104 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
H2AFXP16104 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
H2AFXP16104 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.77■□□□□ 0.6
H2AFXP16104 AC116353.5-201ENST00000638148 1699 ntBASIC18.77■□□□□ 0.6
H2AFXP16104 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2AFXP16104 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.77■□□□□ 0.6
H2AFXP16104 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2AFXP16104 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.77■□□□□ 0.6
H2AFXP16104 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
H2AFXP16104 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.77■□□□□ 0.6
H2AFXP16104 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.77■□□□□ 0.6
H2AFXP16104 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
H2AFXP16104 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.77■□□□□ 0.6
H2AFXP16104 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.77■□□□□ 0.6
H2AFXP16104 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.77■□□□□ 0.6
H2AFXP16104 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.77■□□□□ 0.6
H2AFXP16104 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.77■□□□□ 0.6
H2AFXP16104 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2AFXP16104 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.77■□□□□ 0.6
H2AFXP16104 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2AFXP16104 LYSMD4-203ENST00000378904 2122 ntBASIC18.77■□□□□ 0.6
H2AFXP16104 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2AFXP16104 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2AFXP16104 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2AFXP16104 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
H2AFXP16104 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
H2AFXP16104 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.76■□□□□ 0.59
H2AFXP16104 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
H2AFXP16104 AL109659.2-201ENST00000606809 1674 ntBASIC18.76■□□□□ 0.59
H2AFXP16104 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2AFXP16104 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2AFXP16104 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2AFXP16104 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms