Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC175P0C221 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
CCDC175P0C221 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC175P0C221 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC175P0C221 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC175P0C221 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC175P0C221 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC175P0C221 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC175P0C221 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC175P0C221 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC175P0C221 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 GPAT2P1-201ENST00000444924 1672 ntBASIC19.57■□□□□ 0.72
CCDC175P0C221 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC175P0C221 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC175P0C221 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC175P0C221 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC175P0C221 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 AL138688.1-201ENST00000624851 1594 ntBASIC19.57■□□□□ 0.72
CCDC175P0C221 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC175P0C221 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC175P0C221 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC175P0C221 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC175P0C221 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
CCDC175P0C221 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC175P0C221 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC175P0C221 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC175P0C221 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CCDC175P0C221 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC175P0C221 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC175P0C221 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC175P0C221 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC175P0C221 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC175P0C221 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC175P0C221 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC175P0C221 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC175P0C221 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC175P0C221 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC175P0C221 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC175P0C221 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC175P0C221 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC175P0C221 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 KRT16P1-201ENST00000399124 1418 ntBASIC19.55■□□□□ 0.72
CCDC175P0C221 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC175P0C221 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC175P0C221 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC175P0C221 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC175P0C221 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC175P0C221 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.55■□□□□ 0.72
CCDC175P0C221 AL109923.1-201ENST00000618799 583 ntBASIC19.55■□□□□ 0.72
CCDC175P0C221 AC130371.2-201ENST00000619443 611 ntBASIC19.55■□□□□ 0.72
CCDC175P0C221 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC175P0C221 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC175P0C221 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC175P0C221 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC175P0C221 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC175P0C221 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC175P0C221 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms