Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLTAP09496 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.78■□□□□ 0.76
CLTAP09496 CHCHD2P8-201ENST00000429873 447 ntBASIC19.78■□□□□ 0.76
CLTAP09496 ATP5G2P1-201ENST00000433580 426 ntBASIC19.78■□□□□ 0.76
CLTAP09496 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.78■□□□□ 0.76
CLTAP09496 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CLTAP09496 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.78■□□□□ 0.76
CLTAP09496 AC004263.2-201ENST00000617183 678 ntBASIC19.78■□□□□ 0.76
CLTAP09496 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLTAP09496 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.78■□□□□ 0.76
CLTAP09496 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLTAP09496 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.78■□□□□ 0.76
CLTAP09496 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLTAP09496 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.78■□□□□ 0.76
CLTAP09496 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLTAP09496 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.78■□□□□ 0.76
CLTAP09496 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLTAP09496 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.78■□□□□ 0.76
CLTAP09496 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLTAP09496 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.77■□□□□ 0.76
CLTAP09496 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLTAP09496 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLTAP09496 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CLTAP09496 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLTAP09496 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.77■□□□□ 0.76
CLTAP09496 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.77■□□□□ 0.76
CLTAP09496 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.77■□□□□ 0.76
CLTAP09496 NPAP1P7-201ENST00000613027 823 ntBASIC19.77■□□□□ 0.76
CLTAP09496 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
CLTAP09496 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.77■□□□□ 0.76
CLTAP09496 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLTAP09496 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLTAP09496 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.77■□□□□ 0.76
CLTAP09496 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLTAP09496 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLTAP09496 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLTAP09496 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLTAP09496 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLTAP09496 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLTAP09496 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CLTAP09496 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CLTAP09496 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLTAP09496 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.76■□□□□ 0.75
CLTAP09496 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.76■□□□□ 0.75
CLTAP09496 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.76■□□□□ 0.75
CLTAP09496 AC090616.6-201ENST00000582640 721 ntBASIC19.76■□□□□ 0.75
CLTAP09496 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.76■□□□□ 0.75
CLTAP09496 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CLTAP09496 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLTAP09496 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 ESPNP-201ENST00000270691 2015 ntBASIC19.75■□□□□ 0.75
CLTAP09496 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CLTAP09496 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.75■□□□□ 0.75
CLTAP09496 AP002383.4-201ENST00000442518 975 ntBASIC19.75■□□□□ 0.75
CLTAP09496 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.75■□□□□ 0.75
CLTAP09496 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.75■□□□□ 0.75
CLTAP09496 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.75■□□□□ 0.75
CLTAP09496 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLTAP09496 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLTAP09496 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CLTAP09496 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLTAP09496 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLTAP09496 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
CLTAP09496 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.74■□□□□ 0.75
CLTAP09496 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms