Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LINC00896-202ENST00000609602 2128 ntBASIC18.76■□□□□ 0.59
CD48P09326 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CD48P09326 GNAS-203ENST00000306120 1878 ntBASIC18.76■□□□□ 0.59
CD48P09326 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CD48P09326 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.76■□□□□ 0.59
CD48P09326 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
CD48P09326 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.76■□□□□ 0.59
CD48P09326 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.76■□□□□ 0.59
CD48P09326 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.76■□□□□ 0.59
CD48P09326 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.76■□□□□ 0.59
CD48P09326 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.76■□□□□ 0.59
CD48P09326 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.76■□□□□ 0.59
CD48P09326 AL031432.5-201ENST00000641059 760 ntBASIC18.76■□□□□ 0.59
CD48P09326 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CD48P09326 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.76■□□□□ 0.59
CD48P09326 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CD48P09326 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CD48P09326 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CD48P09326 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.76■□□□□ 0.59
CD48P09326 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
CD48P09326 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CD48P09326 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD48P09326 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.75■□□□□ 0.59
CD48P09326 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.75■□□□□ 0.59
CD48P09326 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CD48P09326 KRT18P55-202ENST00000578578 1546 ntBASIC18.75■□□□□ 0.59
CD48P09326 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.75■□□□□ 0.59
CD48P09326 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.75■□□□□ 0.59
CD48P09326 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.75■□□□□ 0.59
CD48P09326 AL136038.4-201ENST00000603606 1261 ntBASIC18.75■□□□□ 0.59
CD48P09326 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.75■□□□□ 0.59
CD48P09326 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CD48P09326 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.75■□□□□ 0.59
CD48P09326 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.75■□□□□ 0.59
CD48P09326 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.75■□□□□ 0.59
CD48P09326 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.75■□□□□ 0.59
CD48P09326 AC006116.8-202ENST00000587620 1550 ntBASIC18.75■□□□□ 0.59
CD48P09326 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CD48P09326 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD48P09326 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CD48P09326 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CD48P09326 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.74■□□□□ 0.59
CD48P09326 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CD48P09326 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.74■□□□□ 0.59
CD48P09326 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.74■□□□□ 0.59
CD48P09326 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 STARP1-201ENST00000397973 869 ntBASIC18.74■□□□□ 0.59
CD48P09326 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.74■□□□□ 0.59
CD48P09326 AC104076.2-201ENST00000448912 469 ntBASIC18.74■□□□□ 0.59
CD48P09326 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.74■□□□□ 0.59
CD48P09326 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.74■□□□□ 0.59
CD48P09326 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.74■□□□□ 0.59
CD48P09326 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.74■□□□□ 0.59
CD48P09326 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.74■□□□□ 0.59
CD48P09326 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CD48P09326 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CD48P09326 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms