Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.08■□□□□ 0.64
RB1P06400 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.08■□□□□ 0.64
RB1P06400 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.08■□□□□ 0.64
RB1P06400 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RB1P06400 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RB1P06400 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
RB1P06400 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.07■□□□□ 0.64
RB1P06400 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.07■□□□□ 0.64
RB1P06400 KRT18P28-201ENST00000453838 1332 ntBASIC19.07■□□□□ 0.64
RB1P06400 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.07■□□□□ 0.64
RB1P06400 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.07■□□□□ 0.64
RB1P06400 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.07■□□□□ 0.64
RB1P06400 AC108751.1-201ENST00000490852 363 ntBASIC19.07■□□□□ 0.64
RB1P06400 AC136632.2-201ENST00000512891 861 ntBASIC19.07■□□□□ 0.64
RB1P06400 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RB1P06400 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RB1P06400 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.07■□□□□ 0.64
RB1P06400 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.07■□□□□ 0.64
RB1P06400 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RB1P06400 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.07■□□□□ 0.64
RB1P06400 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.07■□□□□ 0.64
RB1P06400 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 SIGLEC16-201ENST00000599858 1437 ntBASIC19.07■□□□□ 0.64
RB1P06400 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RB1P06400 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RB1P06400 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.06■□□□□ 0.64
RB1P06400 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.06■□□□□ 0.64
RB1P06400 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
RB1P06400 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RB1P06400 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.06■□□□□ 0.64
RB1P06400 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.06■□□□□ 0.64
RB1P06400 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.06■□□□□ 0.64
RB1P06400 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.06■□□□□ 0.64
RB1P06400 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.06■□□□□ 0.64
RB1P06400 AD001527.2-201ENST00000622994 785 ntBASIC19.06■□□□□ 0.64
RB1P06400 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RB1P06400 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RB1P06400 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RB1P06400 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
RB1P06400 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RB1P06400 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.05■□□□□ 0.64
RB1P06400 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RB1P06400 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 AL161938.1-201ENST00000569833 2180 ntBASIC19.05■□□□□ 0.64
RB1P06400 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.05■□□□□ 0.64
RB1P06400 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.05■□□□□ 0.64
RB1P06400 AC096633.1-201ENST00000422446 749 ntBASIC19.05■□□□□ 0.64
RB1P06400 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.05■□□□□ 0.64
RB1P06400 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
RB1P06400 YBX1P5-201ENST00000509441 847 ntBASIC19.05■□□□□ 0.64
RB1P06400 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.05■□□□□ 0.64
RB1P06400 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.05■□□□□ 0.64
RB1P06400 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.05■□□□□ 0.64
RB1P06400 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RB1P06400 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.05■□□□□ 0.64
RB1P06400 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.05■□□□□ 0.64
RB1P06400 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RB1P06400 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 286.1 ms