Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 MIR149-201ENST00000384879 89 ntBASIC16.28■□□□□ 0.2
HLA-DQA2P01906 MIR1238-201ENST00000408483 83 ntBASIC16.28■□□□□ 0.2
HLA-DQA2P01906 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 BX088651.1-201ENST00000540551 451 ntBASIC16.28■□□□□ 0.2
HLA-DQA2P01906 C2orf69P3-201ENST00000565542 1120 ntBASIC16.28■□□□□ 0.2
HLA-DQA2P01906 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 TMEM191A-211ENST00000637163 1067 ntBASIC16.28■□□□□ 0.2
HLA-DQA2P01906 AC116562.4-202ENST00000641738 218 ntBASIC16.28■□□□□ 0.2
HLA-DQA2P01906 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DQA2P01906 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 AC134043.2-201ENST00000624206 2238 ntBASIC16.27■□□□□ 0.2
HLA-DQA2P01906 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 KRT17P2-201ENST00000300992 1314 ntBASIC16.27■□□□□ 0.2
HLA-DQA2P01906 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 PHGDH-209ENST00000641074 1780 ntBASIC16.27■□□□□ 0.2
HLA-DQA2P01906 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DQA2P01906 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
HLA-DQA2P01906 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms