Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.55■□□□□ 0.56
TOP3BO95985 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.55■□□□□ 0.56
TOP3BO95985 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.55■□□□□ 0.56
TOP3BO95985 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP3BO95985 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TOP3BO95985 AL162741.1-201ENST00000565563 1558 ntBASIC18.55■□□□□ 0.56
TOP3BO95985 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TOP3BO95985 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TOP3BO95985 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
TOP3BO95985 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TOP3BO95985 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 ESPNP-201ENST00000270691 2015 ntBASIC18.54■□□□□ 0.56
TOP3BO95985 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TOP3BO95985 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TOP3BO95985 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 AL645929.1-201ENST00000420084 975 ntBASIC18.54■□□□□ 0.56
TOP3BO95985 AP002383.4-201ENST00000442518 975 ntBASIC18.54■□□□□ 0.56
TOP3BO95985 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.54■□□□□ 0.56
TOP3BO95985 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.54■□□□□ 0.56
TOP3BO95985 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.54■□□□□ 0.56
TOP3BO95985 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.54■□□□□ 0.56
TOP3BO95985 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.54■□□□□ 0.56
TOP3BO95985 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.54■□□□□ 0.56
TOP3BO95985 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TOP3BO95985 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
TOP3BO95985 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.54■□□□□ 0.56
TOP3BO95985 AC099343.3-201ENST00000605834 2503 ntBASIC18.54■□□□□ 0.56
TOP3BO95985 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
TOP3BO95985 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 AC016734.2-201ENST00000624325 1377 ntBASIC18.54■□□□□ 0.56
TOP3BO95985 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.54■□□□□ 0.56
TOP3BO95985 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TOP3BO95985 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TOP3BO95985 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP3BO95985 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TOP3BO95985 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.53■□□□□ 0.56
TOP3BO95985 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.53■□□□□ 0.56
TOP3BO95985 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP3BO95985 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP3BO95985 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP3BO95985 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TOP3BO95985 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TOP3BO95985 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP3BO95985 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 AL160237.2-201ENST00000556165 472 ntBASIC18.53■□□□□ 0.56
TOP3BO95985 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TOP3BO95985 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TOP3BO95985 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TOP3BO95985 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.53■□□□□ 0.56
TOP3BO95985 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TOP3BO95985 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TOP3BO95985 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP3BO95985 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP3BO95985 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TOP3BO95985 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.52■□□□□ 0.56
TOP3BO95985 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.52■□□□□ 0.56
TOP3BO95985 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TOP3BO95985 KRT8P3-201ENST00000519669 1449 ntBASIC18.52■□□□□ 0.56
TOP3BO95985 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TOP3BO95985 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TOP3BO95985 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP3BO95985 AP000523.1-201ENST00000398242 1049 ntBASIC18.52■□□□□ 0.56
TOP3BO95985 AC092597.1-201ENST00000487352 616 ntBASIC18.52■□□□□ 0.56
TOP3BO95985 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TOP3BO95985 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.52■□□□□ 0.56
TOP3BO95985 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TOP3BO95985 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP3BO95985 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TOP3BO95985 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP3BO95985 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP3BO95985 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms