Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.04■□□□□ 0.8
CLSTN1O94985 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.04■□□□□ 0.8
CLSTN1O94985 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 AC024243.1-201ENST00000609234 778 ntBASIC20.04■□□□□ 0.8
CLSTN1O94985 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.04■□□□□ 0.8
CLSTN1O94985 AC141257.4-201ENST00000634557 245 ntBASIC20.04■□□□□ 0.8
CLSTN1O94985 AC136944.6-201ENST00000634818 245 ntBASIC20.04■□□□□ 0.8
CLSTN1O94985 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.04■□□□□ 0.8
CLSTN1O94985 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.04■□□□□ 0.8
CLSTN1O94985 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.04■□□□□ 0.8
CLSTN1O94985 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLSTN1O94985 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.03■□□□□ 0.8
CLSTN1O94985 AC126763.1-201ENST00000552015 2118 ntBASIC20.03■□□□□ 0.8
CLSTN1O94985 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.03■□□□□ 0.8
CLSTN1O94985 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.03■□□□□ 0.8
CLSTN1O94985 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 MIR564-202ENST00000385049 94 ntBASIC20.03■□□□□ 0.8
CLSTN1O94985 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.03■□□□□ 0.8
CLSTN1O94985 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.03■□□□□ 0.8
CLSTN1O94985 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.03■□□□□ 0.8
CLSTN1O94985 RN7SL850P-201ENST00000579959 291 ntBASIC20.03■□□□□ 0.8
CLSTN1O94985 AC012306.2-201ENST00000609350 630 ntBASIC20.03■□□□□ 0.8
CLSTN1O94985 AC112497.1-201ENST00000624824 639 ntBASIC20.03■□□□□ 0.8
CLSTN1O94985 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CLSTN1O94985 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.03■□□□□ 0.8
CLSTN1O94985 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CLSTN1O94985 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.03■□□□□ 0.8
CLSTN1O94985 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CLSTN1O94985 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLSTN1O94985 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLSTN1O94985 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
CLSTN1O94985 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.02■□□□□ 0.8
CLSTN1O94985 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.02■□□□□ 0.8
CLSTN1O94985 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLSTN1O94985 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLSTN1O94985 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLSTN1O94985 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.02■□□□□ 0.8
CLSTN1O94985 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.02■□□□□ 0.8
CLSTN1O94985 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.02■□□□□ 0.8
CLSTN1O94985 MYC-208ENST00000641036 567 ntBASIC20.02■□□□□ 0.8
CLSTN1O94985 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLSTN1O94985 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.02■□□□□ 0.8
CLSTN1O94985 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.02■□□□□ 0.8
CLSTN1O94985 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLSTN1O94985 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.02■□□□□ 0.8
CLSTN1O94985 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLSTN1O94985 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLSTN1O94985 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLSTN1O94985 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLSTN1O94985 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.01■□□□□ 0.79
CLSTN1O94985 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.01■□□□□ 0.79
CLSTN1O94985 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.01■□□□□ 0.79
CLSTN1O94985 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.01■□□□□ 0.79
CLSTN1O94985 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.01■□□□□ 0.79
CLSTN1O94985 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.01■□□□□ 0.79
CLSTN1O94985 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.01■□□□□ 0.79
CLSTN1O94985 TMPOP1-202ENST00000424642 1267 ntBASIC20.01■□□□□ 0.79
CLSTN1O94985 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.01■□□□□ 0.79
CLSTN1O94985 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.01■□□□□ 0.79
CLSTN1O94985 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 AC068880.1-201ENST00000507289 2297 ntBASIC20.01■□□□□ 0.79
CLSTN1O94985 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLSTN1O94985 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms