Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.33■□□□□ 0.52
USP1O94782 AC010947.1-201ENST00000623454 693 ntBASIC18.33■□□□□ 0.52
USP1O94782 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.33■□□□□ 0.52
USP1O94782 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
USP1O94782 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.33■□□□□ 0.52
USP1O94782 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.33■□□□□ 0.52
USP1O94782 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.33■□□□□ 0.52
USP1O94782 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP1O94782 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
USP1O94782 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
USP1O94782 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP1O94782 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP1O94782 ECEL1P3-201ENST00000427961 737 ntBASIC18.32■□□□□ 0.52
USP1O94782 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.32■□□□□ 0.52
USP1O94782 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.32■□□□□ 0.52
USP1O94782 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
USP1O94782 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.32■□□□□ 0.52
USP1O94782 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.32■□□□□ 0.52
USP1O94782 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
USP1O94782 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.32■□□□□ 0.52
USP1O94782 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP1O94782 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
USP1O94782 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.31■□□□□ 0.52
USP1O94782 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
USP1O94782 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.31■□□□□ 0.52
USP1O94782 LINC00896-202ENST00000609602 2128 ntBASIC18.31■□□□□ 0.52
USP1O94782 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
USP1O94782 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 SEC1P-202ENST00000473944 940 ntBASIC18.31■□□□□ 0.52
USP1O94782 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
USP1O94782 AL512604.3-201ENST00000569583 964 ntBASIC18.31■□□□□ 0.52
USP1O94782 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
USP1O94782 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.31■□□□□ 0.52
USP1O94782 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.31■□□□□ 0.52
USP1O94782 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.31■□□□□ 0.52
USP1O94782 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
USP1O94782 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP1O94782 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
USP1O94782 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.31■□□□□ 0.52
USP1O94782 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.31■□□□□ 0.52
USP1O94782 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.31■□□□□ 0.52
USP1O94782 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP1O94782 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.3■□□□□ 0.52
USP1O94782 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP1O94782 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
USP1O94782 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.3■□□□□ 0.52
USP1O94782 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.3■□□□□ 0.52
USP1O94782 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP1O94782 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms