Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC188H7C350 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC188H7C350 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC188H7C350 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC188H7C350 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC188H7C350 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC188H7C350 SLC25A1P4-201ENST00000567977 778 ntBASIC18.82■□□□□ 0.6
CCDC188H7C350 MIR4674-201ENST00000582457 87 ntBASIC18.82■□□□□ 0.6
CCDC188H7C350 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC188H7C350 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC188H7C350 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC188H7C350 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC188H7C350 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC188H7C350 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC188H7C350 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC188H7C350 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC188H7C350 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC188H7C350 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC188H7C350 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC188H7C350 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC188H7C350 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC188H7C350 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC188H7C350 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC188H7C350 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC188H7C350 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC188H7C350 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC188H7C350 MIR3180-4-201ENST00000582223 153 ntBASIC18.81■□□□□ 0.6
CCDC188H7C350 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC188H7C350 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC188H7C350 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC188H7C350 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC188H7C350 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC188H7C350 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC188H7C350 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
CCDC188H7C350 NKILA-202ENST00000614771 2598 ntBASIC18.81■□□□□ 0.6
CCDC188H7C350 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC188H7C350 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC188H7C350 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC188H7C350 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC188H7C350 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC188H7C350 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC188H7C350 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC188H7C350 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC188H7C350 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC188H7C350 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC188H7C350 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC188H7C350 C1QBPP2-201ENST00000528754 825 ntBASIC18.8■□□□□ 0.6
CCDC188H7C350 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC188H7C350 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC188H7C350 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC188H7C350 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 CROCCP2-202ENST00000412962 2773 ntBASIC18.8■□□□□ 0.6
CCDC188H7C350 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC188H7C350 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC188H7C350 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC188H7C350 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC188H7C350 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC188H7C350 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC188H7C350 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC188H7C350 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC188H7C350 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC188H7C350 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC188H7C350 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms