Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01546A6NGU7 GPAT2P1-201ENST00000444924 1672 ntBASIC12.77□□□□□ -0.37
LINC01546A6NGU7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.76□□□□□ -0.37
LINC01546A6NGU7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 PNMA6B-201ENST00000538162 1200 ntBASIC12.76□□□□□ -0.37
LINC01546A6NGU7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 NBPF21P-201ENST00000425093 1451 ntBASIC12.76□□□□□ -0.37
LINC01546A6NGU7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
LINC01546A6NGU7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01546A6NGU7 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.75□□□□□ -0.37
LINC01546A6NGU7 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.75□□□□□ -0.37
LINC01546A6NGU7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms