Protein–RNA interactions for Protein: A0PJX0

CIB4, Calcium and integrin-binding family member 4, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIB4A0PJX0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CIB4A0PJX0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CIB4A0PJX0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CIB4A0PJX0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CIB4A0PJX0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CIB4A0PJX0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.42■□□□□ 0.22
CIB4A0PJX0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.42■□□□□ 0.22
CIB4A0PJX0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 AC022616.7-201ENST00000525383 220 ntBASIC16.41■□□□□ 0.22
CIB4A0PJX0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CIB4A0PJX0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.41■□□□□ 0.22
CIB4A0PJX0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 ANO7L1-203ENST00000602586 1720 ntBASIC16.4■□□□□ 0.22
CIB4A0PJX0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 HOMER2P1-201ENST00000455653 964 ntBASIC16.4■□□□□ 0.22
CIB4A0PJX0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 AC063952.2-201ENST00000498792 1227 ntBASIC16.4■□□□□ 0.22
CIB4A0PJX0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 AL441883.1-201ENST00000566170 1045 ntBASIC16.4■□□□□ 0.22
CIB4A0PJX0 AC087388.1-201ENST00000571370 1112 ntBASIC16.4■□□□□ 0.22
CIB4A0PJX0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 NTF6B-201ENST00000591913 560 ntBASIC16.4■□□□□ 0.22
CIB4A0PJX0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.4■□□□□ 0.22
CIB4A0PJX0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CIB4A0PJX0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CIB4A0PJX0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CIB4A0PJX0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.39■□□□□ 0.22
CIB4A0PJX0 PCDHA12-202ENST00000613593 2588 ntBASIC16.39■□□□□ 0.22
CIB4A0PJX0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms