Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV4A0A0C4DH28 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.03□□□□□ -0.32
TRGV4A0A0C4DH28 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRGV4A0A0C4DH28 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV4A0A0C4DH28 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AC104390.1-201ENST00000555663 520 ntBASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AC024243.1-201ENST00000609234 778 ntBASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AC092865.7-201ENST00000641832 219 ntBASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AC135776.1-201ENST00000319817 2481 ntBASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 AL354751.1-201ENST00000412768 1863 ntBASIC13.02□□□□□ -0.33
TRGV4A0A0C4DH28 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 FAM87A-204ENST00000613235 858 ntBASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 AC133561.5-201ENST00000635547 218 ntBASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV4A0A0C4DH28 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV4A0A0C4DH28 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV4A0A0C4DH28 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms