Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-7A0A0A0MS04 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 ABHD17AP1-201ENST00000358206 933 ntBASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 RPS2P55-201ENST00000397318 883 ntBASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 CRYGFP-201ENST00000418459 633 ntBASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC107956.1-201ENST00000494359 873 ntBASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 AP001412.1-201ENST00000608405 714 ntBASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 REXO1L10P-201ENST00000615707 1290 ntBASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 REXO1L12P-201ENST00000622156 912 ntBASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-7A0A0A0MS04 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV6-7A0A0A0MS04 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC099343.3-201ENST00000605834 2503 ntBASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC093010.1-201ENST00000473625 1624 ntBASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC012618.2-201ENST00000428058 849 ntBASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 AP005242.2-201ENST00000580065 1175 ntBASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 AC113410.3-201ENST00000623366 203 ntBASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRBV6-7A0A0A0MS04 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms