Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
S4R3C0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.4■□□□□ 0.7
S4R3C0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
S4R3C0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.4■□□□□ 0.7
S4R3C0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
S4R3C0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
S4R3C0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.39■□□□□ 0.69
S4R3C0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
S4R3C0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
S4R3C0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.38■□□□□ 0.69
S4R3C0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.38■□□□□ 0.69
S4R3C0 MIR219A2-201ENST00000608502 1504 ntBASIC19.38■□□□□ 0.69
S4R3C0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.37■□□□□ 0.69
S4R3C0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
S4R3C0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.37■□□□□ 0.69
S4R3C0 AP004609.3-201ENST00000610705 1884 ntBASIC19.37■□□□□ 0.69
S4R3C0 WHAMMP3-201ENST00000611636 1609 ntBASIC19.36■□□□□ 0.69
S4R3C0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
S4R3C0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
S4R3C0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
S4R3C0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.36■□□□□ 0.69
S4R3C0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
S4R3C0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
S4R3C0 AC008813.1-201ENST00000536597 885 ntBASIC19.36■□□□□ 0.69
S4R3C0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
S4R3C0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
S4R3C0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
S4R3C0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
S4R3C0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
S4R3C0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.35■□□□□ 0.69
S4R3C0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.35■□□□□ 0.69
S4R3C0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
S4R3C0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
S4R3C0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.35■□□□□ 0.69
S4R3C0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
S4R3C0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.35■□□□□ 0.69
S4R3C0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
S4R3C0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
S4R3C0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
S4R3C0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
S4R3C0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
S4R3C0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.34■□□□□ 0.69
S4R3C0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.34■□□□□ 0.69
S4R3C0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
S4R3C0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
S4R3C0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
S4R3C0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
S4R3C0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.33■□□□□ 0.69
S4R3C0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
S4R3C0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.33■□□□□ 0.68
S4R3C0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.33■□□□□ 0.68
S4R3C0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.33■□□□□ 0.68
S4R3C0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.33■□□□□ 0.68
S4R3C0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
S4R3C0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
S4R3C0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
S4R3C0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
S4R3C0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
S4R3C0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.32■□□□□ 0.68
S4R3C0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.32■□□□□ 0.68
S4R3C0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
S4R3C0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
S4R3C0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
S4R3C0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
S4R3C0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
S4R3C0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
S4R3C0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
S4R3C0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
S4R3C0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.3■□□□□ 0.68
S4R3C0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
S4R3C0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.3■□□□□ 0.68
S4R3C0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
S4R3C0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
S4R3C0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.3■□□□□ 0.68
S4R3C0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
S4R3C0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
S4R3C0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
S4R3C0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
S4R3C0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
S4R3C0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.29■□□□□ 0.68
S4R3C0 AC148477.6-201ENST00000623746 465 ntBASIC19.29■□□□□ 0.68
S4R3C0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
S4R3C0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
S4R3C0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.28■□□□□ 0.68
S4R3C0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
S4R3C0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
S4R3C0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
S4R3C0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.27■□□□□ 0.68
S4R3C0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.26■□□□□ 0.67
S4R3C0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.26■□□□□ 0.67
S4R3C0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
S4R3C0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.26■□□□□ 0.67
S4R3C0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
S4R3C0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
S4R3C0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
S4R3C0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
S4R3C0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.25■□□□□ 0.67
S4R3C0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.25■□□□□ 0.67
S4R3C0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
S4R3C0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms