Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHA9Q9Y5H5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PCDHA9Q9Y5H5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA9Q9Y5H5 AC020928.2-201ENST00000588717 2197 ntBASIC23.78■■□□□ 1.4
PCDHA9Q9Y5H5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PCDHA9Q9Y5H5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA9Q9Y5H5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHA9Q9Y5H5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDHA9Q9Y5H5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA9Q9Y5H5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDHA9Q9Y5H5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHA9Q9Y5H5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHA9Q9Y5H5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA9Q9Y5H5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA9Q9Y5H5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA9Q9Y5H5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHA9Q9Y5H5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHA9Q9Y5H5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA9Q9Y5H5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHA9Q9Y5H5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA9Q9Y5H5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA9Q9Y5H5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHA9Q9Y5H5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA9Q9Y5H5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
PCDHA9Q9Y5H5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA9Q9Y5H5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA9Q9Y5H5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHA9Q9Y5H5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA9Q9Y5H5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA9Q9Y5H5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA9Q9Y5H5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA9Q9Y5H5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA9Q9Y5H5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHA9Q9Y5H5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHA9Q9Y5H5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
PCDHA9Q9Y5H5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA9Q9Y5H5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHA9Q9Y5H5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA9Q9Y5H5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA9Q9Y5H5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PCDHA9Q9Y5H5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
PCDHA9Q9Y5H5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA9Q9Y5H5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHA9Q9Y5H5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA9Q9Y5H5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA9Q9Y5H5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.7■■□□□ 1.38
PCDHA9Q9Y5H5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHA9Q9Y5H5 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA9Q9Y5H5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA9Q9Y5H5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA9Q9Y5H5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA9Q9Y5H5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA9Q9Y5H5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA9Q9Y5H5 DUSP8P4-201ENST00000399538 1761 ntBASIC23.68■■□□□ 1.38
PCDHA9Q9Y5H5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHA9Q9Y5H5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHA9Q9Y5H5 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHA9Q9Y5H5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDHA9Q9Y5H5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHA9Q9Y5H5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA9Q9Y5H5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA9Q9Y5H5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA9Q9Y5H5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHA9Q9Y5H5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA9Q9Y5H5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA9Q9Y5H5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA9Q9Y5H5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA9Q9Y5H5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA9Q9Y5H5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA9Q9Y5H5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA9Q9Y5H5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA9Q9Y5H5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHA9Q9Y5H5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA9Q9Y5H5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA9Q9Y5H5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PCDHA9Q9Y5H5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA9Q9Y5H5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA9Q9Y5H5 CR559946.2-201ENST00000623684 991 ntBASIC23.65■■□□□ 1.38
PCDHA9Q9Y5H5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHA9Q9Y5H5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA9Q9Y5H5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
PCDHA9Q9Y5H5 AC092803.2-201ENST00000564287 1899 ntBASIC23.64■■□□□ 1.38
PCDHA9Q9Y5H5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHA9Q9Y5H5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHA9Q9Y5H5 AC008813.1-201ENST00000536597 885 ntBASIC23.64■■□□□ 1.37
PCDHA9Q9Y5H5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.63■■□□□ 1.37
PCDHA9Q9Y5H5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHA9Q9Y5H5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHA9Q9Y5H5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PCDHA9Q9Y5H5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA9Q9Y5H5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHA9Q9Y5H5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA9Q9Y5H5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDHA9Q9Y5H5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA9Q9Y5H5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA9Q9Y5H5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PCDHA9Q9Y5H5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA9Q9Y5H5 MIR3648-2-201ENST00000581792 180 ntBASIC23.61■■□□□ 1.37
PCDHA9Q9Y5H5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHA9Q9Y5H5 MIR3648-1-201ENST00000615959 180 ntBASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms