Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PCDHGA6Q9Y5G7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHGA6Q9Y5G7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA6Q9Y5G7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA6Q9Y5G7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHGA6Q9Y5G7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA6Q9Y5G7 AC018358.1-201ENST00000631079 1402 ntBASIC23.74■■□□□ 1.39
PCDHGA6Q9Y5G7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.73■■□□□ 1.39
PCDHGA6Q9Y5G7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA6Q9Y5G7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGA6Q9Y5G7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHGA6Q9Y5G7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGA6Q9Y5G7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGA6Q9Y5G7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PCDHGA6Q9Y5G7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHGA6Q9Y5G7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA6Q9Y5G7 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHGA6Q9Y5G7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGA6Q9Y5G7 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHGA6Q9Y5G7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
PCDHGA6Q9Y5G7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
PCDHGA6Q9Y5G7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGA6Q9Y5G7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHGA6Q9Y5G7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PCDHGA6Q9Y5G7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA6Q9Y5G7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA6Q9Y5G7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PCDHGA6Q9Y5G7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PCDHGA6Q9Y5G7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.69■■□□□ 1.38
PCDHGA6Q9Y5G7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA6Q9Y5G7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGA6Q9Y5G7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGA6Q9Y5G7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA6Q9Y5G7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PCDHGA6Q9Y5G7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA6Q9Y5G7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA6Q9Y5G7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA6Q9Y5G7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGA6Q9Y5G7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA6Q9Y5G7 AL033527.3-201ENST00000566366 1196 ntBASIC23.67■■□□□ 1.38
PCDHGA6Q9Y5G7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA6Q9Y5G7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGA6Q9Y5G7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCDHGA6Q9Y5G7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
PCDHGA6Q9Y5G7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA6Q9Y5G7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA6Q9Y5G7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA6Q9Y5G7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA6Q9Y5G7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHGA6Q9Y5G7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGA6Q9Y5G7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PCDHGA6Q9Y5G7 KRT18P60-201ENST00000312876 1297 ntBASIC23.65■■□□□ 1.38
PCDHGA6Q9Y5G7 AL157400.5-201ENST00000507624 621 ntBASIC23.65■■□□□ 1.38
PCDHGA6Q9Y5G7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA6Q9Y5G7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGA6Q9Y5G7 BX255925.1-201ENST00000566954 1854 ntBASIC23.64■■□□□ 1.38
PCDHGA6Q9Y5G7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA6Q9Y5G7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHGA6Q9Y5G7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA6Q9Y5G7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGA6Q9Y5G7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHGA6Q9Y5G7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHGA6Q9Y5G7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHGA6Q9Y5G7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHGA6Q9Y5G7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA6Q9Y5G7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHGA6Q9Y5G7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHGA6Q9Y5G7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHGA6Q9Y5G7 TSPY13P-201ENST00000338964 914 ntBASIC23.62■■□□□ 1.37
PCDHGA6Q9Y5G7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHGA6Q9Y5G7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PCDHGA6Q9Y5G7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 AC135731.1-201ENST00000569415 2548 ntBASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHGA6Q9Y5G7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PCDHGA6Q9Y5G7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHGA6Q9Y5G7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHGA6Q9Y5G7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHGA6Q9Y5G7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 AC100797.4-201ENST00000631653 1827 ntBASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 ATP5G2P3-201ENST00000429083 425 ntBASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA6Q9Y5G7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA6Q9Y5G7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHGA6Q9Y5G7 AC004987.1-201ENST00000428627 508 ntBASIC23.58■■□□□ 1.37
PCDHGA6Q9Y5G7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHGA6Q9Y5G7 AC007029.1-201ENST00000604183 313 ntBASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms