Protein–RNA interactions for Protein: Q9Y279

VSIG4, V-set and immunoglobulin domain-containing protein 4, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4Q9Y279 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 DUX4L28-201ENST00000623687 678 ntBASIC20.78■□□□□ 0.92
VSIG4Q9Y279 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VSIG4Q9Y279 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VSIG4Q9Y279 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VSIG4Q9Y279 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.77■□□□□ 0.92
VSIG4Q9Y279 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VSIG4Q9Y279 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.77■□□□□ 0.91
VSIG4Q9Y279 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
VSIG4Q9Y279 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSIG4Q9Y279 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VSIG4Q9Y279 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VSIG4Q9Y279 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VSIG4Q9Y279 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VSIG4Q9Y279 ERN1-208ENST00000606895 2068 ntBASIC20.74■□□□□ 0.91
VSIG4Q9Y279 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VSIG4Q9Y279 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VSIG4Q9Y279 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VSIG4Q9Y279 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VSIG4Q9Y279 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VSIG4Q9Y279 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VSIG4Q9Y279 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.74■□□□□ 0.91
VSIG4Q9Y279 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VSIG4Q9Y279 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
VSIG4Q9Y279 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VSIG4Q9Y279 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
VSIG4Q9Y279 AC135983.2-203ENST00000454486 1613 ntBASIC20.73■□□□□ 0.91
VSIG4Q9Y279 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VSIG4Q9Y279 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VSIG4Q9Y279 AC087741.3-201ENST00000624270 1347 ntBASIC20.72■□□□□ 0.91
VSIG4Q9Y279 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.71■□□□□ 0.91
VSIG4Q9Y279 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VSIG4Q9Y279 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VSIG4Q9Y279 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VSIG4Q9Y279 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.71■□□□□ 0.91
VSIG4Q9Y279 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
VSIG4Q9Y279 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VSIG4Q9Y279 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VSIG4Q9Y279 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
VSIG4Q9Y279 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.7■□□□□ 0.9
VSIG4Q9Y279 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
VSIG4Q9Y279 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.7■□□□□ 0.9
VSIG4Q9Y279 AC044849.2-201ENST00000606596 710 ntBASIC20.7■□□□□ 0.9
VSIG4Q9Y279 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VSIG4Q9Y279 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
VSIG4Q9Y279 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VSIG4Q9Y279 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
VSIG4Q9Y279 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VSIG4Q9Y279 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VSIG4Q9Y279 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VSIG4Q9Y279 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VSIG4Q9Y279 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VSIG4Q9Y279 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VSIG4Q9Y279 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSIG4Q9Y279 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSIG4Q9Y279 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSIG4Q9Y279 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSIG4Q9Y279 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VSIG4Q9Y279 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VSIG4Q9Y279 WHAMMP2-203ENST00000563942 1603 ntBASIC20.67■□□□□ 0.9
VSIG4Q9Y279 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSIG4Q9Y279 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSIG4Q9Y279 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSIG4Q9Y279 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSIG4Q9Y279 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSIG4Q9Y279 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSIG4Q9Y279 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VSIG4Q9Y279 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VSIG4Q9Y279 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VSIG4Q9Y279 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.65■□□□□ 0.9
VSIG4Q9Y279 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
VSIG4Q9Y279 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VSIG4Q9Y279 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VSIG4Q9Y279 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.63■□□□□ 0.89
VSIG4Q9Y279 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.63■□□□□ 0.89
VSIG4Q9Y279 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VSIG4Q9Y279 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.62■□□□□ 0.89
VSIG4Q9Y279 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG4Q9Y279 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG4Q9Y279 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG4Q9Y279 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG4Q9Y279 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG4Q9Y279 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG4Q9Y279 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.61■□□□□ 0.89
VSIG4Q9Y279 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms