Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NOTCH3Q9UM47 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.97■□□□□ 0.63
NOTCH3Q9UM47 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NOTCH3Q9UM47 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOTCH3Q9UM47 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.97■□□□□ 0.63
NOTCH3Q9UM47 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.97■□□□□ 0.63
NOTCH3Q9UM47 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOTCH3Q9UM47 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
NOTCH3Q9UM47 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NOTCH3Q9UM47 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.96■□□□□ 0.63
NOTCH3Q9UM47 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NOTCH3Q9UM47 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NOTCH3Q9UM47 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.96■□□□□ 0.63
NOTCH3Q9UM47 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NOTCH3Q9UM47 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.96■□□□□ 0.63
NOTCH3Q9UM47 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NOTCH3Q9UM47 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NOTCH3Q9UM47 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NOTCH3Q9UM47 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NOTCH3Q9UM47 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.95■□□□□ 0.62
NOTCH3Q9UM47 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
NOTCH3Q9UM47 ABCB10P3-201ENST00000561950 2166 ntBASIC18.95■□□□□ 0.62
NOTCH3Q9UM47 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NOTCH3Q9UM47 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NOTCH3Q9UM47 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.95■□□□□ 0.62
NOTCH3Q9UM47 SMPD5-203ENST00000639008 1464 ntBASIC18.95■□□□□ 0.62
NOTCH3Q9UM47 AC131212.1-201ENST00000613771 668 ntBASIC18.95■□□□□ 0.62
NOTCH3Q9UM47 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 AL139393.2-201ENST00000608721 2025 ntBASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.94■□□□□ 0.62
NOTCH3Q9UM47 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NOTCH3Q9UM47 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NOTCH3Q9UM47 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
NOTCH3Q9UM47 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NOTCH3Q9UM47 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NOTCH3Q9UM47 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.93■□□□□ 0.62
NOTCH3Q9UM47 AC010980.1-201ENST00000587192 1142 ntBASIC18.93■□□□□ 0.62
NOTCH3Q9UM47 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NOTCH3Q9UM47 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.93■□□□□ 0.62
NOTCH3Q9UM47 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 KRT8P33-201ENST00000508125 1423 ntBASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 RP9P-202ENST00000450133 1212 ntBASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 AC026202.3-201ENST00000600805 1127 ntBASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NOTCH3Q9UM47 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 AP004833.2-201ENST00000532228 1454 ntBASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 AC019069.1-201ENST00000610008 1333 ntBASIC18.91■□□□□ 0.62
NOTCH3Q9UM47 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NOTCH3Q9UM47 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.9■□□□□ 0.62
NOTCH3Q9UM47 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.9■□□□□ 0.62
NOTCH3Q9UM47 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.9■□□□□ 0.62
NOTCH3Q9UM47 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.9■□□□□ 0.62
NOTCH3Q9UM47 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NOTCH3Q9UM47 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.9■□□□□ 0.62
NOTCH3Q9UM47 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NOTCH3Q9UM47 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.89■□□□□ 0.61
NOTCH3Q9UM47 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NOTCH3Q9UM47 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
NOTCH3Q9UM47 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NOTCH3Q9UM47 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NOTCH3Q9UM47 SPCS2P3-201ENST00000500401 656 ntBASIC18.88■□□□□ 0.61
NOTCH3Q9UM47 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.88■□□□□ 0.61
NOTCH3Q9UM47 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NOTCH3Q9UM47 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.88■□□□□ 0.61
NOTCH3Q9UM47 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NOTCH3Q9UM47 GUSBP5-201ENST00000418136 578 ntBASIC18.88■□□□□ 0.61
NOTCH3Q9UM47 AC074183.2-201ENST00000623112 922 ntBASIC18.88■□□□□ 0.61
NOTCH3Q9UM47 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.87■□□□□ 0.61
NOTCH3Q9UM47 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
NOTCH3Q9UM47 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NOTCH3Q9UM47 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.87■□□□□ 0.61
NOTCH3Q9UM47 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NOTCH3Q9UM47 AC139795.1-202ENST00000500444 432 ntBASIC18.86■□□□□ 0.61
NOTCH3Q9UM47 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NOTCH3Q9UM47 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NOTCH3Q9UM47 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NOTCH3Q9UM47 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NOTCH3Q9UM47 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.86■□□□□ 0.61
NOTCH3Q9UM47 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 317.2 ms