Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC40.95■■■■■ 4.15
RIMBP3Q9UFD9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC40.94■■■■■ 4.14
RIMBP3Q9UFD9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC40.94■■■■■ 4.14
RIMBP3Q9UFD9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC40.94■■■■■ 4.14
RIMBP3Q9UFD9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC40.93■■■■■ 4.14
RIMBP3Q9UFD9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC40.93■■■■■ 4.14
RIMBP3Q9UFD9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC40.92■■■■■ 4.14
RIMBP3Q9UFD9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC40.92■■■■■ 4.14
RIMBP3Q9UFD9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC40.92■■■■■ 4.14
RIMBP3Q9UFD9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC40.91■■■■■ 4.14
RIMBP3Q9UFD9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC40.91■■■■■ 4.14
RIMBP3Q9UFD9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC40.91■■■■■ 4.14
RIMBP3Q9UFD9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC40.9■■■■■ 4.14
RIMBP3Q9UFD9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC40.9■■■■■ 4.14
RIMBP3Q9UFD9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC40.89■■■■■ 4.14
RIMBP3Q9UFD9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC40.89■■■■■ 4.14
RIMBP3Q9UFD9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC40.89■■■■■ 4.14
RIMBP3Q9UFD9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
RIMBP3Q9UFD9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC40.87■■■■■ 4.13
RIMBP3Q9UFD9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC40.87■■■■■ 4.13
RIMBP3Q9UFD9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC40.86■■■■■ 4.13
RIMBP3Q9UFD9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC40.85■■■■■ 4.13
RIMBP3Q9UFD9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC40.85■■■■■ 4.13
RIMBP3Q9UFD9 ZNRF2P3-201ENST00000424200 374 ntBASIC40.85■■■■■ 4.13
RIMBP3Q9UFD9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC40.85■■■■■ 4.13
RIMBP3Q9UFD9 MIR4787-201ENST00000607364 84 ntBASIC40.85■■■■■ 4.13
RIMBP3Q9UFD9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC40.84■■■■■ 4.13
RIMBP3Q9UFD9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC40.84■■■■■ 4.13
RIMBP3Q9UFD9 AC005837.3-201ENST00000612163 286 ntBASIC40.84■■■■■ 4.13
RIMBP3Q9UFD9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC40.82■■■■■ 4.13
RIMBP3Q9UFD9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.13
RIMBP3Q9UFD9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.12
RIMBP3Q9UFD9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC40.81■■■■■ 4.12
RIMBP3Q9UFD9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC40.81■■■■■ 4.12
RIMBP3Q9UFD9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC40.81■■■■■ 4.12
RIMBP3Q9UFD9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC40.8■■■■■ 4.12
RIMBP3Q9UFD9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC40.79■■■■■ 4.12
RIMBP3Q9UFD9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC40.79■■■■■ 4.12
RIMBP3Q9UFD9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC40.78■■■■■ 4.12
RIMBP3Q9UFD9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC40.78■■■■■ 4.12
RIMBP3Q9UFD9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
RIMBP3Q9UFD9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC40.78■■■■■ 4.12
RIMBP3Q9UFD9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC40.78■■■■■ 4.12
RIMBP3Q9UFD9 AC018755.3-202ENST00000596210 929 ntBASIC40.78■■■■■ 4.12
RIMBP3Q9UFD9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
RIMBP3Q9UFD9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
RIMBP3Q9UFD9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC40.77■■■■■ 4.12
RIMBP3Q9UFD9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC40.77■■■■■ 4.12
RIMBP3Q9UFD9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
RIMBP3Q9UFD9 AL136116.3-201ENST00000402907 1138 ntBASIC40.76■■■■■ 4.12
RIMBP3Q9UFD9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC40.76■■■■■ 4.12
RIMBP3Q9UFD9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC40.76■■■■■ 4.12
RIMBP3Q9UFD9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC40.76■■■■■ 4.12
RIMBP3Q9UFD9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC40.75■■■■■ 4.11
RIMBP3Q9UFD9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC40.75■■■■■ 4.11
RIMBP3Q9UFD9 KRT125P-201ENST00000546827 989 ntBASIC40.75■■■■■ 4.11
RIMBP3Q9UFD9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
RIMBP3Q9UFD9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
RIMBP3Q9UFD9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC40.72■■■■■ 4.11
RIMBP3Q9UFD9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC40.72■■■■■ 4.11
RIMBP3Q9UFD9 AC019171.1-201ENST00000601251 1056 ntBASIC40.72■■■■■ 4.11
RIMBP3Q9UFD9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
RIMBP3Q9UFD9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC40.71■■■■■ 4.11
RIMBP3Q9UFD9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC40.71■■■■■ 4.11
RIMBP3Q9UFD9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC40.71■■■■■ 4.11
RIMBP3Q9UFD9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC40.7■■■■■ 4.11
RIMBP3Q9UFD9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC40.69■■■■■ 4.1
RIMBP3Q9UFD9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC40.67■■■■■ 4.1
RIMBP3Q9UFD9 BX664725.1-201ENST00000438252 379 ntBASIC40.67■■■■■ 4.1
RIMBP3Q9UFD9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC40.67■■■■■ 4.1
RIMBP3Q9UFD9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC40.66■■■■■ 4.1
RIMBP3Q9UFD9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC40.66■■■■■ 4.1
RIMBP3Q9UFD9 AL161658.1-201ENST00000623641 1967 ntBASIC40.66■■■■■ 4.1
RIMBP3Q9UFD9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC40.65■■■■■ 4.1
RIMBP3Q9UFD9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC40.65■■■■■ 4.1
RIMBP3Q9UFD9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC40.65■■■■■ 4.1
RIMBP3Q9UFD9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 AC096631.2-201ENST00000436136 790 ntBASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC40.64■■■■■ 4.1
RIMBP3Q9UFD9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC40.63■■■■■ 4.1
RIMBP3Q9UFD9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC40.63■■■■■ 4.09
RIMBP3Q9UFD9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC40.63■■■■■ 4.09
RIMBP3Q9UFD9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC40.63■■■■■ 4.09
RIMBP3Q9UFD9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC40.63■■■■■ 4.09
RIMBP3Q9UFD9 AL359258.2-201ENST00000564063 1566 ntBASIC40.63■■■■■ 4.09
RIMBP3Q9UFD9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC40.62■■■■■ 4.09
RIMBP3Q9UFD9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
RIMBP3Q9UFD9 MIR3960-201ENST00000583311 91 ntBASIC40.62■■■■■ 4.09
RIMBP3Q9UFD9 SRR-208ENST00000576848 588 ntTSL 4 BASIC40.61■■■■■ 4.09
RIMBP3Q9UFD9 MIR5787-201ENST00000611784 55 ntBASIC40.61■■■■■ 4.09
RIMBP3Q9UFD9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC40.6■■■■■ 4.09
RIMBP3Q9UFD9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC40.6■■■■■ 4.09
RIMBP3Q9UFD9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms