Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC32.08■■■□□ 2.73
TFCP2L1Q9NZI6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
TFCP2L1Q9NZI6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC32.08■■■□□ 2.73
TFCP2L1Q9NZI6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
TFCP2L1Q9NZI6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.06■■■□□ 2.72
TFCP2L1Q9NZI6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
TFCP2L1Q9NZI6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
TFCP2L1Q9NZI6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC32.06■■■□□ 2.72
TFCP2L1Q9NZI6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
TFCP2L1Q9NZI6 AC103724.3-201ENST00000564481 992 ntBASIC32.05■■■□□ 2.72
TFCP2L1Q9NZI6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC32.05■■■□□ 2.72
TFCP2L1Q9NZI6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32.05■■■□□ 2.72
TFCP2L1Q9NZI6 AL031848.2-201ENST00000607670 837 ntBASIC32.05■■■□□ 2.72
TFCP2L1Q9NZI6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
TFCP2L1Q9NZI6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
TFCP2L1Q9NZI6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.03■■■□□ 2.72
TFCP2L1Q9NZI6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC32.03■■■□□ 2.72
TFCP2L1Q9NZI6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
TFCP2L1Q9NZI6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC32.02■■■□□ 2.72
TFCP2L1Q9NZI6 MIR3960-201ENST00000583311 91 ntBASIC32.02■■■□□ 2.72
TFCP2L1Q9NZI6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
TFCP2L1Q9NZI6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
TFCP2L1Q9NZI6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC32■■■□□ 2.71
TFCP2L1Q9NZI6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC32■■■□□ 2.71
TFCP2L1Q9NZI6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32■■■□□ 2.71
TFCP2L1Q9NZI6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC32■■■□□ 2.71
TFCP2L1Q9NZI6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
TFCP2L1Q9NZI6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32■■■□□ 2.71
TFCP2L1Q9NZI6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
TFCP2L1Q9NZI6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
TFCP2L1Q9NZI6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TFCP2L1Q9NZI6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TFCP2L1Q9NZI6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TFCP2L1Q9NZI6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TFCP2L1Q9NZI6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
TFCP2L1Q9NZI6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
TFCP2L1Q9NZI6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.96■■■□□ 2.71
TFCP2L1Q9NZI6 AC008406.3-201ENST00000620001 1374 ntBASIC31.95■■■□□ 2.71
TFCP2L1Q9NZI6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
TFCP2L1Q9NZI6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
TFCP2L1Q9NZI6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TFCP2L1Q9NZI6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.94■■■□□ 2.7
TFCP2L1Q9NZI6 AC239859.2-201ENST00000444165 318 ntBASIC31.94■■■□□ 2.7
TFCP2L1Q9NZI6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
TFCP2L1Q9NZI6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.94■■■□□ 2.7
TFCP2L1Q9NZI6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.94■■■□□ 2.7
TFCP2L1Q9NZI6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
TFCP2L1Q9NZI6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
TFCP2L1Q9NZI6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TFCP2L1Q9NZI6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.93■■■□□ 2.7
TFCP2L1Q9NZI6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
TFCP2L1Q9NZI6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.92■■■□□ 2.7
TFCP2L1Q9NZI6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.92■■■□□ 2.7
TFCP2L1Q9NZI6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
TFCP2L1Q9NZI6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
TFCP2L1Q9NZI6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
TFCP2L1Q9NZI6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TFCP2L1Q9NZI6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
TFCP2L1Q9NZI6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.9■■■□□ 2.7
TFCP2L1Q9NZI6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TFCP2L1Q9NZI6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
TFCP2L1Q9NZI6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TFCP2L1Q9NZI6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.89■■■□□ 2.7
TFCP2L1Q9NZI6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
TFCP2L1Q9NZI6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TFCP2L1Q9NZI6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TFCP2L1Q9NZI6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.88■■■□□ 2.69
TFCP2L1Q9NZI6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TFCP2L1Q9NZI6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
TFCP2L1Q9NZI6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
TFCP2L1Q9NZI6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TFCP2L1Q9NZI6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TFCP2L1Q9NZI6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
TFCP2L1Q9NZI6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TFCP2L1Q9NZI6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.86■■■□□ 2.69
TFCP2L1Q9NZI6 AC100797.4-201ENST00000631653 1827 ntBASIC31.84■■■□□ 2.69
TFCP2L1Q9NZI6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TFCP2L1Q9NZI6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.84■■■□□ 2.69
TFCP2L1Q9NZI6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TFCP2L1Q9NZI6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.83■■■□□ 2.69
TFCP2L1Q9NZI6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
TFCP2L1Q9NZI6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TFCP2L1Q9NZI6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TFCP2L1Q9NZI6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TFCP2L1Q9NZI6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.81■■■□□ 2.68
TFCP2L1Q9NZI6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.8■■■□□ 2.68
TFCP2L1Q9NZI6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TFCP2L1Q9NZI6 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.8■■■□□ 2.68
TFCP2L1Q9NZI6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.8■■■□□ 2.68
TFCP2L1Q9NZI6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
TFCP2L1Q9NZI6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
TFCP2L1Q9NZI6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.79■■■□□ 2.68
TFCP2L1Q9NZI6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.79■■■□□ 2.68
TFCP2L1Q9NZI6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TFCP2L1Q9NZI6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TFCP2L1Q9NZI6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.78■■■□□ 2.68
TFCP2L1Q9NZI6 AP004833.2-201ENST00000532228 1454 ntBASIC31.78■■■□□ 2.68
TFCP2L1Q9NZI6 Z92544.1-202ENST00000571933 1220 ntBASIC31.77■■■□□ 2.68
TFCP2L1Q9NZI6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TFCP2L1Q9NZI6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms