Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.28■■□□□ 1.32
NEUROD4Q9HD90 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
NEUROD4Q9HD90 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEUROD4Q9HD90 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NEUROD4Q9HD90 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEUROD4Q9HD90 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NEUROD4Q9HD90 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEUROD4Q9HD90 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NEUROD4Q9HD90 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEUROD4Q9HD90 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEUROD4Q9HD90 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.25■■□□□ 1.31
NEUROD4Q9HD90 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
NEUROD4Q9HD90 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEUROD4Q9HD90 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NEUROD4Q9HD90 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NEUROD4Q9HD90 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NEUROD4Q9HD90 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NEUROD4Q9HD90 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
NEUROD4Q9HD90 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.24■■□□□ 1.31
NEUROD4Q9HD90 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.24■■□□□ 1.31
NEUROD4Q9HD90 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NEUROD4Q9HD90 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NEUROD4Q9HD90 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.23■■□□□ 1.31
NEUROD4Q9HD90 AC148477.6-201ENST00000623746 465 ntBASIC23.23■■□□□ 1.31
NEUROD4Q9HD90 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
NEUROD4Q9HD90 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.23■■□□□ 1.31
NEUROD4Q9HD90 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.23■■□□□ 1.31
NEUROD4Q9HD90 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
NEUROD4Q9HD90 AC091060.1-201ENST00000623524 1766 ntBASIC23.22■■□□□ 1.31
NEUROD4Q9HD90 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEUROD4Q9HD90 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
NEUROD4Q9HD90 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NEUROD4Q9HD90 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NEUROD4Q9HD90 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.21■■□□□ 1.31
NEUROD4Q9HD90 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEUROD4Q9HD90 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
NEUROD4Q9HD90 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
NEUROD4Q9HD90 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NEUROD4Q9HD90 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.2■■□□□ 1.3
NEUROD4Q9HD90 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NEUROD4Q9HD90 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NEUROD4Q9HD90 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEUROD4Q9HD90 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEUROD4Q9HD90 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.19■■□□□ 1.3
NEUROD4Q9HD90 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEUROD4Q9HD90 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEUROD4Q9HD90 AC145676.1-201ENST00000514988 2004 ntBASIC23.19■■□□□ 1.3
NEUROD4Q9HD90 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEUROD4Q9HD90 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NEUROD4Q9HD90 MIR219A2-201ENST00000608502 1504 ntBASIC23.18■■□□□ 1.3
NEUROD4Q9HD90 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NEUROD4Q9HD90 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEUROD4Q9HD90 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEUROD4Q9HD90 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.18■■□□□ 1.3
NEUROD4Q9HD90 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.18■■□□□ 1.3
NEUROD4Q9HD90 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.18■■□□□ 1.3
NEUROD4Q9HD90 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NEUROD4Q9HD90 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.17■■□□□ 1.3
NEUROD4Q9HD90 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NEUROD4Q9HD90 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NEUROD4Q9HD90 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.17■■□□□ 1.3
NEUROD4Q9HD90 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.17■■□□□ 1.3
NEUROD4Q9HD90 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NEUROD4Q9HD90 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEUROD4Q9HD90 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NEUROD4Q9HD90 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.16■■□□□ 1.3
NEUROD4Q9HD90 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.16■■□□□ 1.3
NEUROD4Q9HD90 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.16■■□□□ 1.3
NEUROD4Q9HD90 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEUROD4Q9HD90 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.15■■□□□ 1.3
NEUROD4Q9HD90 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEUROD4Q9HD90 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.15■■□□□ 1.3
NEUROD4Q9HD90 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NEUROD4Q9HD90 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NEUROD4Q9HD90 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NEUROD4Q9HD90 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NEUROD4Q9HD90 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.14■■□□□ 1.29
NEUROD4Q9HD90 MIR4449-201ENST00000578365 66 ntBASIC23.14■■□□□ 1.29
NEUROD4Q9HD90 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NEUROD4Q9HD90 AC092803.2-201ENST00000564287 1899 ntBASIC23.13■■□□□ 1.29
NEUROD4Q9HD90 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NEUROD4Q9HD90 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
NEUROD4Q9HD90 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
NEUROD4Q9HD90 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.13■■□□□ 1.29
NEUROD4Q9HD90 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
NEUROD4Q9HD90 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NEUROD4Q9HD90 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.13■■□□□ 1.29
NEUROD4Q9HD90 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NEUROD4Q9HD90 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
NEUROD4Q9HD90 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
NEUROD4Q9HD90 CR559946.2-201ENST00000623684 991 ntBASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms