Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDHD3Q9BSH5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.79■□□□□ 0.92
HDHD3Q9BSH5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HDHD3Q9BSH5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HDHD3Q9BSH5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDHD3Q9BSH5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HDHD3Q9BSH5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDHD3Q9BSH5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HDHD3Q9BSH5 AC142472.1-201ENST00000612013 1741 ntBASIC20.78■□□□□ 0.92
HDHD3Q9BSH5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDHD3Q9BSH5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HDHD3Q9BSH5 AC044849.2-201ENST00000606596 710 ntBASIC20.77■□□□□ 0.92
HDHD3Q9BSH5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HDHD3Q9BSH5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDHD3Q9BSH5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HDHD3Q9BSH5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HDHD3Q9BSH5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 WHAMMP3-201ENST00000611636 1609 ntBASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.76■□□□□ 0.91
HDHD3Q9BSH5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HDHD3Q9BSH5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 AC021231.2-201ENST00000594613 730 ntBASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HDHD3Q9BSH5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HDHD3Q9BSH5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDHD3Q9BSH5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDHD3Q9BSH5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDHD3Q9BSH5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDHD3Q9BSH5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HDHD3Q9BSH5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HDHD3Q9BSH5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.72■□□□□ 0.91
HDHD3Q9BSH5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDHD3Q9BSH5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HDHD3Q9BSH5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HDHD3Q9BSH5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.72■□□□□ 0.91
HDHD3Q9BSH5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDHD3Q9BSH5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HDHD3Q9BSH5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HDHD3Q9BSH5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDHD3Q9BSH5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HDHD3Q9BSH5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HDHD3Q9BSH5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HDHD3Q9BSH5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDHD3Q9BSH5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDHD3Q9BSH5 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDHD3Q9BSH5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.7■□□□□ 0.9
HDHD3Q9BSH5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDHD3Q9BSH5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDHD3Q9BSH5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDHD3Q9BSH5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HDHD3Q9BSH5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HDHD3Q9BSH5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDHD3Q9BSH5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HDHD3Q9BSH5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDHD3Q9BSH5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HDHD3Q9BSH5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HDHD3Q9BSH5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDHD3Q9BSH5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.68■□□□□ 0.9
HDHD3Q9BSH5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDHD3Q9BSH5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDHD3Q9BSH5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDHD3Q9BSH5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDHD3Q9BSH5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDHD3Q9BSH5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDHD3Q9BSH5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.67■□□□□ 0.9
HDHD3Q9BSH5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HDHD3Q9BSH5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDHD3Q9BSH5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.66■□□□□ 0.9
HDHD3Q9BSH5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HDHD3Q9BSH5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.66■□□□□ 0.9
HDHD3Q9BSH5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.66■□□□□ 0.9
HDHD3Q9BSH5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
HDHD3Q9BSH5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDHD3Q9BSH5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
HDHD3Q9BSH5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDHD3Q9BSH5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
HDHD3Q9BSH5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HDHD3Q9BSH5 DUX4L29-201ENST00000425409 679 ntBASIC20.65■□□□□ 0.9
HDHD3Q9BSH5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDHD3Q9BSH5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HDHD3Q9BSH5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HDHD3Q9BSH5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HDHD3Q9BSH5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.64■□□□□ 0.89
HDHD3Q9BSH5 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms