Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC6A7Q99884 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.33■■□□□ 1
SLC6A7Q99884 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.32■■□□□ 1
SLC6A7Q99884 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC6A7Q99884 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A7Q99884 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.32■■□□□ 1
SLC6A7Q99884 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.32■■□□□ 1
SLC6A7Q99884 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC6A7Q99884 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.31■■□□□ 1
SLC6A7Q99884 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC6A7Q99884 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A7Q99884 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.31■■□□□ 1
SLC6A7Q99884 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.31■■□□□ 1
SLC6A7Q99884 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC6A7Q99884 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A7Q99884 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A7Q99884 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLC6A7Q99884 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLC6A7Q99884 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC6A7Q99884 DUX4L13-201ENST00000554103 1267 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 DUX4L15-201ENST00000611059 1267 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 DUX4L23-201ENST00000615195 1269 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 DUX4L24-201ENST00000617576 1269 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 DUX4L22-201ENST00000618238 1269 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 DUX4L20-201ENST00000619712 1269 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 DUX4L21-201ENST00000622058 1269 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 DUX4L10-201ENST00000622460 1267 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 DUX4L25-201ENST00000624915 1269 ntBASIC21.3■■□□□ 1
SLC6A7Q99884 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A7Q99884 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A7Q99884 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC6A7Q99884 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC6A7Q99884 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC6A7Q99884 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.29■■□□□ 1
SLC6A7Q99884 AC020928.2-201ENST00000588717 2197 ntBASIC21.29■■□□□ 1
SLC6A7Q99884 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC6A7Q99884 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.28■■□□□ 1
SLC6A7Q99884 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.28■■□□□ 1
SLC6A7Q99884 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.28■■□□□ 1
SLC6A7Q99884 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SLC6A7Q99884 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.28■■□□□ 1
SLC6A7Q99884 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC6A7Q99884 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A7Q99884 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A7Q99884 AP002414.2-202ENST00000590929 1450 ntBASIC21.27■■□□□ 1
SLC6A7Q99884 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A7Q99884 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A7Q99884 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC6A7Q99884 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A7Q99884 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A7Q99884 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.27■■□□□ 1
SLC6A7Q99884 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.27■■□□□ 1
SLC6A7Q99884 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.27■■□□□ 1
SLC6A7Q99884 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC6A7Q99884 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC6A7Q99884 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.27■□□□□ 0.99
SLC6A7Q99884 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A7Q99884 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC6A7Q99884 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SLC6A7Q99884 AC145676.1-201ENST00000514988 2004 ntBASIC21.26■□□□□ 0.99
SLC6A7Q99884 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A7Q99884 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A7Q99884 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC6A7Q99884 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SLC6A7Q99884 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SLC6A7Q99884 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A7Q99884 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC6A7Q99884 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A7Q99884 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC6A7Q99884 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC6A7Q99884 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A7Q99884 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A7Q99884 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A7Q99884 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A7Q99884 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC6A7Q99884 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A7Q99884 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A7Q99884 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A7Q99884 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A7Q99884 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A7Q99884 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A7Q99884 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A7Q99884 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SLC6A7Q99884 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A7Q99884 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A7Q99884 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SLC6A7Q99884 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A7Q99884 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A7Q99884 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
SLC6A7Q99884 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SLC6A7Q99884 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.19■□□□□ 0.98
SLC6A7Q99884 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SLC6A7Q99884 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A7Q99884 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC6A7Q99884 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A7Q99884 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SLC6A7Q99884 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A7Q99884 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A7Q99884 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms